Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00994 ATGGCTCTAAGAGACGAAACTCCAGCTGTTCAAAACCCTCCATTGGTTTTTGATGCACTCCTCTGTGAGGAAGATAGTGTTGAGGAGGACTATGGTGAGACTGCTCTTGATGATGCTGAACATGTGATTGCAGGAAAGGCTTCACCTTTAACTTTAGTTTTGTTAGAAAGTGATTTGTTTTGGGAGGAAGATGAGCTGTTGTCTCTTCTATCCAAAGAAGAACAGACCCATTTCGATTTTAGTCGTATGCTGGCTGATCAATCTCTTCTTAGAGCTCGCCAGGAGGCTGTGCGCTGGATTTCAAAAGTCAGCTTGCAGTTAGGGTTCTCTGCTTTGACCATTGTTCTTGGGGTGAACTACTTTGATAGGTTCAGTACTAGCTTGACTTTCCAAAAGGATAAGCCTTGGATGACTCAACTTGCCGCAGTTGCTTGCCTGTCTTTGGCTGCTAAGGTGGAGGAGACCCATGTGCCACTTCTTTTAGACTTGCAGCAGGTGGAGGAAACAAAATATCTGTTTGAAGCCAAGACCATCCAAAGAATGGAGCTTCTGGTGCTATCCACTCTCAAGTGGAGGATGAATCTGGTAACTCCAATTGCTTACTTTGAACACATTGTTAGGAGGCTTGGTTTAAAGACCCCATTGCATTGGGATTTCCTGCGTGAGTGTGAGCTCCTGCTTCTCTCCGTAATTGCTGATTCAAGAATCATAGGCTGTCTTCCTTCGACATTAGCTGCTGCAACAATGATCCGGGTTACAGAAGAGATCGACCCTCGTAATGCAATGGAATACCACAATCAGCTTCTCAGTGTCATGAAAATAAGTGAGGAAAAGGTTGATGAATGCTACAAGCTCTTACCCAAAGTATTAGATTGCCATGGCGACATTCAAATCTCTCGCAGCAAGAGGAAGCACTTATCTGTGCCAAGCAGCCCAGATGGGGTTATTGATGCATCTTTCAGCTGTGATAGCTCAAATGATTCGTGGGTTGTTTCATCACCGGTCTCACTTTCTCTGGCACCACTTCTCAAGAAGAGCAGATCACAGGACCAGCCAATGCGACTATCATCCCTGAGTGCCCTGTCTGTAGATGTGCTTGCAAGCCCCCCTTAA 1113 0.4546 MALRDETPAVQNPPLVFDALLCEEDSVEEDYGETALDDAEHVIAGKASPLTLVLLESDLFWEEDELLSLLSKEEQTHFDFSRMLADQSLLRARQEAVRWISKVSLQLGFSALTIVLGVNYFDRFSTSLTFQKDKPWMTQLAAVACLSLAAKVEETHVPLLLDLQQVEETKYLFEAKTIQRMELLVLSTLKWRMNLVTPIAYFEHIVRRLGLKTPLHWDFLRECELLLLSVIADSRIIGCLPSTLAAATMIRVTEEIDPRNAMEYHNQLLSVMKISEEKVDECYKLLPKVLDCHGDIQISRSKRKHLSVPSSPDGVIDASFSCDSSNDSWVVSSPVSLSLAPLLKKSRSQDQPMRLSSLSALSVDVLASPP* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00994 370 Gene3D - 79 194 - -
Pte14g00994 370 PANTHER CYCLINS 65 287 IPR039361 -
Pte14g00994 370 CDD CYCLIN_AtCycD-like_rpt2 196 286 - -
Pte14g00994 370 SMART cyclin_7 98 187 IPR013763 -
Pte14g00994 370 ProSitePatterns Cyclins signature. 93 124 IPR006671 -
Pte14g00994 370 FunFam D6-type cyclin 76 194 - -
Pte14g00994 370 Pfam Cyclin, C-terminal domain 196 305 IPR004367 -
Pte14g00994 370 FunFam CYCLIN D32 195 284 - -
Pte14g00994 370 SUPERFAMILY Cyclin-like 61 194 IPR036915 -
Pte14g00994 370 Pfam Cyclin, N-terminal domain 71 194 IPR006671 -
Pte14g00994 370 CDD CYCLIN_AtCycD-like_rpt1 92 191 - -
Pte14g00994 370 SMART Cyclin_C_2 196 324 IPR004367 -
Pte14g00994 370 Gene3D - 68 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00994 Pte-Chr14 31551578 31554797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00994 1 359 Core Cell Cycle Gene Families AT5G67260 49.189 3.14e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00994 K14505 - qsa:O6P43_024601 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00994 14 31551578 31554797 Pte12g00328 12 2687375 2690422 RCT
Pte14g00994 14 31551578 31554797 Pte2g00372 2 2874872 2876338 RCT
Pte1g02523 1 45657263 45658799 Pte14g00994 14 31551578 31554797 RCT
Pte2g00372 2 2874872 2876338 Pte14g00994 14 31551578 31554797 RCT
Pte14g00994 14 31551578 31554797 Pte14g00994 14 31551578 31554797 RCT