Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00980 ATGGGAGATCATATGTACGAGTATGGCAGGAGTACCTGTTCTTCATCAACCTCCACTTCTTCCCCACCTGACGACCTCTCGGTTTTTCTGCAGCAGATTCTTCTCCGTTCATCTTCATCTTCCGCATCTTCTTCCACTTCCCTCATGGCGCACATAGGTAAAGATGGACAGTCTTCTATGCCTTCAACGTCCATGGCGGGACTCTGCAGGACCAGTACTGCAGGAGAGAATCTACATCCTTCCCCAGGACCCACATTATTCCAAGATGGAATTTTGGCAGTTGATTCCACAAATGGAGGGAGCACTTTAGGTGGGGTTCGCTTCTCCACCTTGCCGTCTTACAATGTCACTGGAACCTCTGCTGCAAATGTCTCTCCATCGTCTATGGGAGTGAGTGAGAACGAAACGGATGAGTATGACTGTGAAAGCGAGGAGAATGCTGAGGCATGGGTGGAAGAGTTGCCAGTAAAGCCGGTTCCTCCTCGAAATTCATCAAAGAGGAGCAGAGCAGCTGAAGTTCACAACTTGTCTGAAAAGAGAAGAAGGAGTAGGATCAACGAGAAAATGAAGGCGCTGCAGAATTTAATTCCCAACTCTAATAAAACGGACAAAGCTTCAATGCTTGACGAAGCTATAGAATACCTTAAACAACTTCAGCTTCAAGTTCAGATGCTATCAATGAGAAATGGGATGACTTTGCATCCAGTGTGCTTGCCAGGAGCACTGCAGCATATTCCTCTATCCCAAATGAGGATGGACTGTGGAGAAGAAAACAGGCCCTTGCCCTTAAACTTGACAAGCATTCTTCCGTTGCAGCAAGACAATCTTATTCATGAGGTGCACGGCCTAGTCAACCAATGTACTACCTTGAACCCGCCACCAGTTCCCTCATTGACGTACATACTAAACACAGATGCTTCTGAATTAGACTCCTCTATTCAATCTCATTTAAGGCCTTTTCATCTGCAAAGAACCTCTGAGGGCATGTCCAGGGAAGACATGTTGCGTCATCAGCATTTGAATGCAATTCACTCACAAACAAACAGCTTAGAAGTTCATTCTGGATGCTCAGCTTCATTGTCATCATCTTTTATTGCTCAAACGTCCGAGTTCAAGGATAAGAACACTTTTGAGACCTGCATCACAGGTAGAGGTAATCAAGCACCAGAATTGGCTAATAGAAAGACGCAGCAGAATCTTATCATACCTACATCCCAATTAAGTAGGTAA 1230 0.4528 MGDHMYEYGRSTCSSSTSTSSPPDDLSVFLQQILLRSSSSSASSSTSLMAHIGKDGQSSMPSTSMAGLCRTSTAGENLHPSPGPTLFQDGILAVDSTNGGSTLGGVRFSTLPSYNVTGTSAANVSPSSMGVSENETDEYDCESEENAEAWVEELPVKPVPPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGMTLHPVCLPGALQHIPLSQMRMDCGEENRPLPLNLTSILPLQQDNLIHEVHGLVNQCTTLNPPPVPSLTYILNTDASELDSSIQSHLRPFHLQRTSEGMSREDMLRHQHLNAIHSQTNSLEVHSGCSASLSSSFIAQTSEFKDKNTFETCITGRGNQAPELANRKTQQNLIIPTSQLSR* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00980 409 Gene3D - 164 229 IPR036638 GO:0046983
Pte14g00980 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
Pte14g00980 409 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 11 344 IPR031066 -
Pte14g00980 409 MobiDBLite consensus disorder prediction 38 84 - -
Pte14g00980 409 MobiDBLite consensus disorder prediction 38 79 - -
Pte14g00980 409 MobiDBLite consensus disorder prediction 1 24 - -
Pte14g00980 409 CDD bHLH_AtPIF_like 169 232 IPR047265 -
Pte14g00980 409 FunFam Basic helix-loop-helix transcription factor 164 227 - -
Pte14g00980 409 Coils Coil 208 228 - -
Pte14g00980 409 MobiDBLite consensus disorder prediction 157 181 - -
Pte14g00980 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 230 IPR036638 GO:0046983
Pte14g00980 409 MobiDBLite consensus disorder prediction 9 24 - -
Pte14g00980 409 Pfam Helix-loop-helix DNA-binding domain 173 219 IPR011598 GO:0046983
Pte14g00980 409 MobiDBLite consensus disorder prediction 167 181 - -
Pte14g00980 409 SMART finulus 175 224 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00980 Pte-Chr14 31362373 31366204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00980 134 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 54.299 9.29e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte14g00980 HLH 4.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00980 - - qlo:115995012 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00980 14 31362373 31366204 Pte14g00980 14 31362373 31366204 RCT