Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00975 ATGGAGCGAAAGCTTGTGGTTCTAGGCATTCCATGGGATGTTGATACAGAAAGGCTGAGAGATTACATGAGCAAATATGGGGATTTGGAAGACTGCATTGTTATGAAGGAGCGTGCAACAGGCCGTTCTCGGGGCTTTGGGTATGTAACATTTGCATCTCCTGATGATGCTAAAAAAGCATTATCTAGTGAGCATGTTCTTGGGAACAGAATGTTGGAAGTCAAAATTGCGACGCCAAAGGAGGAGATGAGAGCACCTGCTAAGAAAGTTACTAGAATATTTGTAGCAAGGATCTCACCATCTGTTACGGAAGCGACATTTAGAAGCCATTTCGAGAAGTATGGTGATATAACAGATTTATACATGCCAAAGGATCAAGGTTCAAAAACACACCGTGGAATTGGATTTATCACCTTCGCGAGTGCAGAATCTGTGGAAAGTCTGATGAATGACACTCACGAACTGGGAGGTTCAACTGTAGTGGTTGATCGAGCAACACCTAAGGAAGATGACTTCAGGCCTATAGGTAGGATGCCACAGGGTGGATATGGTGCCTACAATGCTTATATTTCTGCAGCAACTAGATATGCTGCACTTGGTGCGCCTACTCTGTATGATCACCCTGGTCCTGGCCCGGGTTTAGGTCTGGGCCTTGGACCAGGCCCTGCTTATGGAAGGAGAGAGCCAATTCGTGGAATGGGCAGAAAAATTTTTGTTGGTCGGCTTCCCCAGGAGGCAACTGCAGAGGATCTCCGCCAGTATTTTGGCAGATTTGGCCGTGTTTTAGATGCTTATGTACCACGTGATCCTAAGAGAACAGGCCATAGAGGTTTTGGATTTGTAACGTTTGCCGATGATGGGGTGGCAGATCGTGTGTCTAGGAGGTCTCATGAGATCTGCGGGAGTCAGGTTGCTATAGATTCAGCTACACCACTAGACGATGCTGGACCTAGCTCAAGTTTTATGAACCCTCCTGATACTTTTACGGGCTATGGTGGCCCCATGCGCACCTACGGCAGGATGTATGGGAGTTTTGATTTTGATGATTGGGGTTATGGAATCGGTGGTGCAAGGCCTTCAAGAGCAGATTGGAGGTACAGGCCATATTAG 1110 0.4694 MERKLVVLGIPWDVDTERLRDYMSKYGDLEDCIVMKERATGRSRGFGYVTFASPDDAKKALSSEHVLGNRMLEVKIATPKEEMRAPAKKVTRIFVARISPSVTEATFRSHFEKYGDITDLYMPKDQGSKTHRGIGFITFASAESVESLMNDTHELGGSTVVVDRATPKEDDFRPIGRMPQGGYGAYNAYISAATRYAALGAPTLYDHPGPGPGLGLGLGPGPAYGRREPIRGMGRKIFVGRLPQEATAEDLRQYFGRFGRVLDAYVPRDPKRTGHRGFGFVTFADDGVADRVSRRSHEICGSQVAIDSATPLDDAGPSSSFMNPPDTFTGYGGPMRTYGRMYGSFDFDDWGYGIGGARPSRADWRYRPY* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00975 369 SUPERFAMILY RNA-binding domain, RBD 3 85 IPR035979 GO:0003676
Pte14g00975 369 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 235 311 IPR000504 GO:0003723
Pte14g00975 369 FunFam RNA-binding family protein isoform 1 232 315 - -
Pte14g00975 369 Gene3D - 1 82 IPR012677 -
Pte14g00975 369 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 3 79 IPR000504 GO:0003723
Pte14g00975 369 Gene3D - 233 315 IPR012677 -
Pte14g00975 369 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 237 291 IPR000504 GO:0003723
Pte14g00975 369 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 64 IPR000504 GO:0003723
Pte14g00975 369 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 159 IPR000504 GO:0003723
Pte14g00975 369 FunFam heterogeneous nuclear ribonucleoprotein 1 1 82 - -
Pte14g00975 369 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 167 IPR000504 GO:0003723
Pte14g00975 369 SUPERFAMILY RNA-binding domain, RBD 88 186 IPR035979 GO:0003676
Pte14g00975 369 FunFam heterogeneous nuclear ribonucleoprotein 1 83 175 - -
Pte14g00975 369 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 232 343 - -
Pte14g00975 369 Gene3D - 83 192 IPR012677 -
Pte14g00975 369 SUPERFAMILY RNA-binding domain, RBD 234 340 IPR035979 GO:0003676
Pte14g00975 369 SMART rrm1_1 4 75 IPR000504 GO:0003723
Pte14g00975 369 SMART rrm1_1 92 163 IPR000504 GO:0003723
Pte14g00975 369 SMART rrm1_1 236 307 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00975 Pte-Chr14 31323603 31327152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00975 4 85 Eukaryotic Initiation Factors Gene Family AT2G23350 32.143 3.64e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00975 K14411 - qsa:O6P43_024629 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00975 14 31323603 31327152 Pte14g00975 14 31323603 31327152 RCT