Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00972 ATGGCACAGAGATCGGTTCCGGCGCCATTTTTGACGAAGACGTACCAGTTGGTTGACGATCCCAGCACAGACGATGTGATATCTTGGAGTGAAAGTGGCAACACTTTTGTTGTGTGGAAGACTGCAGATTTTGCAAGAGATTTACTGCCCAGATATTTCAAACACAATAATTTCTCAAGCTTTGTTCGCCAGCTTAATACTTACGGCTTTCGAAAGATTGTACCAGACAAATGGGAGTTTGCCAACGAAAATTTCAAGAGAGGAGAAAAAGGCCTACTCTCGGAAATTCGACGCCGGAAATCTGTAGCACAGACTTCGATGATGCCTGTAGCTGCCATTAAATCAGCCGGTGGCGATGGCGTTCGCTCGCCCTCAAACACTGGCGGTGGCGAGGACGTGGGATCCAGCTCCACCTCTTCCCCGGATTCTAAGAACCCGGGCTCGCTTGAGACAACTATGACGATGGAGTACGCTGGTCTAACTGACGAGAACGAGCGGTTGAAGAAGGACAACGCGTTGCTCCGTACCGAGCTTGCCCAAGCTCAGAAGCAGTGCGACGAGCTGGTGGCATTTCTGACCGATTATTTGAAAGTGGGTCCTGATCAGATCCATCGCATCATGCGGCAAGGAACTTGTGGGTCCAGCCGCGATGGATTGACTGAAGAAAAAGACGACGGAAAGGTTACAGTTCATTCCGATGATGACGAAAAAGTTGCTGTAGATAGTCGAGAAAAGTGTGAGAACAGTACTAGGAGTTGTCTGAAACTGTTTGGGGTTTGGTTGAGCGACAAGGATGAGAAAACGGGAGTGGCAGCAACGGAGAAGGAAAGTAACGAGAAGAAGAGGAAAGCGCGAGACGAGAATTTGGGGCTTGGTCTCGGTGGGAATCGGAAACACCATCATCACACTAAGGAATGCAAGAGTATGAGTGCAGATTTCGGTGCTGTATCTGTTTAA 957 0.489 MAQRSVPAPFLTKTYQLVDDPSTDDVISWSESGNTFVVWKTADFARDLLPRYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGEKGLLSEIRRRKSVAQTSMMPVAAIKSAGGDGVRSPSNTGGGEDVGSSSTSSPDSKNPGSLETTMTMEYAGLTDENERLKKDNALLRTELAQAQKQCDELVAFLTDYLKVGPDQIHRIMRQGTCGSSRDGLTEEKDDGKVTVHSDDDEKVAVDSREKCENSTRSCLKLFGVWLSDKDEKTGVAATEKESNEKKRKARDENLGLGLGGNRKHHHHTKECKSMSADFGAVSV* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00972 318 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00972 318 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00972 318 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00972 318 Coils Coil 157 184 - -
Pte14g00972 318 Gene3D - 148 196 - -
Pte14g00972 318 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Pte14g00972 318 Gene3D - 2 100 IPR036388 -
Pte14g00972 318 MobiDBLite consensus disorder prediction 268 318 - -
Pte14g00972 318 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00972 318 FunFam Heat stress transcription factor B-4 2 100 - -
Pte14g00972 318 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00972 318 MobiDBLite consensus disorder prediction 268 294 - -
Pte14g00972 318 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 211 IPR027725 -
Pte14g00972 318 MobiDBLite consensus disorder prediction 128 150 - -
Pte14g00972 318 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00972 318 MobiDBLite consensus disorder prediction 107 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00972 Pte-Chr14 31307252 31308614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00972 2 272 HSF AT4G36990 52.330 1.01e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte14g00972 HSF_DNA-bind 1.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00972 K09419 - qsa:O6P43_033819 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00972 14 31307252 31308614 Pte14g00972 14 31307252 31308614 RCT