Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00966 ATGAGTATCGTGGATGATCACATTGGTCCCTCAAGGTATGAGGATCTTAATCATGACGACTTGCTGGATCTGGACGATGGTTCTGACCGTACGGACTTCTCCTTCGCTGAATTCAATGAACCTCTGGAGGAAGATGATGTTGTAACGCATTCACCAGTCTCTATGGCTAGCAAGTCTGTCTCTCCTGCTTCAACCCCGGGTAGACGATTCAACATGGTAGACTCAAAACACAGGCCTTCAAGTATCAACGAGTTTCCGAATTCAACCACCAGACGTAACATAGCTGCTCGACCCCAGAATTTTATCAGCTCTAGCAAGGCAATAGATGGAGCATCTTCCCGTGGTGAGGCCAAGTCATCTGCTGTAATTCGAGCAGAGAAGGTCAGGTCTAATCTCGAGCCAGAATACCCCAGCTTCGTGAAGTCCTTGGTCAGATCACATGTTGCTAGTTGTTTCTGGATGGGGCTTCCTGGATTGTTTTGTAAGAGACATTTACCAAACAAGGATGCAACAGTGATATTGGAAGATGAAGCTGGTAAAGAAATCAAAGTGAAATACATTGCATGCAAGACAGGGTTAAGTTCTGGTTGGAGACATTTTTCTGTTGGTCACAAACTGATGGAGGGAGATACTTTAGTCTTTCAATTGGTAGAGCCCACTAGATTTAAGGTTTACATAATAAAGGCTAAGGATTCAACAGAGATGGATGGAGCTCTTCCCTGCCGCAATCTAGAAATAGACGCTTTGGCAAAACAAAATATGAGAGGAAAAAACAACGGTTTGGGAATTTTTGCTTATGATACTTCCAAAAGAAGAAGTCCTAAATCTTTCCTAGACGTTGCTCAAAAGAAGGATAAGAAGGATAAGACTCTTGTACCAAAACTGACCCCTGCATTTCAACAATCAGTACAAGAATCTGAGTATGACAGTGAAGAGGCCAGTTCAGAAGTGCTTGATGACTTGAGACCATCTATTTCCTTCATGGACGTGGAAAACTTTGAGAATTTCAGAATTCTGATTAATGGTGTAGCTGTTGATTCTGAGTTCACTGATGAAGTTCGAAGGAAGTACTACGAGCTTTGTTGTAGCCAGCAAGCCTTTCTTCATGATAACCTTATAAAAGGCATAAGTCCTGTGTTCGTTGTCGGAGCTATAGCTGAGATTGTTTTTATTGCTGATGCCATAAAATCTTGTAATCTAAATACCCCTCGGGATGAATATACCAAATGGGACAAAACGTTTCTTGCATTTCAGCATCTAGGCATGAATGTACAGTTTTTACGGCTTCGACTACGCCGTATTGTGAGCCTTGCCTTTGAATCCGAAGAAGCCACAGAAACCAGGACATACATCGAGGCCAGAAGGGAAAAAGCTCGTGCAGTAGATGAAATTACTAATATTGAAGCAAAGTTTGAAACTTTGAAGGGAGCTTTTGATGGCTTTGGTGCCTATGTTCATAGTCTCAAGTCCAAGACAGAAAGTTTCCAGCAGGAGTTTAACTCAGAAGTTGAGGCACCATGGTGA 1524 0.4239 MSIVDDHIGPSRYEDLNHDDLLDLDDGSDRTDFSFAEFNEPLEEDDVVTHSPVSMASKSVSPASTPGRRFNMVDSKHRPSSINEFPNSTTRRNIAARPQNFISSSKAIDGASSRGEAKSSAVIRAEKVRSNLEPEYPSFVKSLVRSHVASCFWMGLPGLFCKRHLPNKDATVILEDEAGKEIKVKYIACKTGLSSGWRHFSVGHKLMEGDTLVFQLVEPTRFKVYIIKAKDSTEMDGALPCRNLEIDALAKQNMRGKNNGLGIFAYDTSKRRSPKSFLDVAQKKDKKDKTLVPKLTPAFQQSVQESEYDSEEASSEVLDDLRPSISFMDVENFENFRILINGVAVDSEFTDEVRRKYYELCCSQQAFLHDNLIKGISPVFVVGAIAEIVFIADAIKSCNLNTPRDEYTKWDKTFLAFQHLGMNVQFLRLRLRRIVSLAFESEEATETRTYIEARREKARAVDEITNIEAKFETLKGAFDGFGAYVHSLKSKTESFQQEFNSEVEAPW* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00966 507 SMART B3_2 139 230 IPR003340 GO:0003677
Pte14g00966 507 SUPERFAMILY DNA-binding pseudobarrel domain 132 229 IPR015300 -
Pte14g00966 507 CDD B3_DNA 137 228 IPR003340 GO:0003677
Pte14g00966 507 MobiDBLite consensus disorder prediction 54 87 - -
Pte14g00966 507 Coils Coil 450 470 - -
Pte14g00966 507 ProSiteProfiles B3 DNA-binding domain profile. 139 230 IPR003340 GO:0003677
Pte14g00966 507 Gene3D - 116 232 IPR015300 -
Pte14g00966 507 MobiDBLite consensus disorder prediction 54 68 - -
Pte14g00966 507 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 77 230 IPR044837 -
Pte14g00966 507 Pfam B3 DNA binding domain 139 228 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00966 Pte-Chr14 31288791 31291550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00966 116 236 B3 DNA Binding Superfamily AT3G19184 47.934 2.49e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte14g00966 B3 1.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00966 - - qsa:O6P43_024643 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00966 14 31288791 31291550 Pte2g00354 2 2685857 2688457 RCT
Pte14g00966 14 31288791 31291550 Pte14g00966 14 31288791 31291550 RCT