Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00952 ATGGAGCTGAGTTTAGATTTGAGTTTGACATATGTCCCGAGGACCATATCTGAGTTGCTTGGTGATGTTTCCAGAACTACAATTGGGGCTGAGAGATTATCCAAGCTCGAGGATTTTCTCAGAAGATTGGAAAATGAGATGAGAAAAATCGAAGCTTTTAAACGTGAACTTCCTCTTTGCATGCATTTAATGAACGATGCTATAGAGAGGTTGAAGGAGCAGAAAGTGCAGTACATGAAAATGCAAGATCAACCTGCGGTTAAAGCATTCAACCCTCTGAAGAAGTCCAGTGTAGAAGTTGGCGCTGTTGATAATTGCAACGATAAGAAAAGCTGGATGAGTTCAGCTCAATTATGGAGCACCGATACTAGATCGACGATTGAAGAAGATGACCGGTCTGTGCCTGAGAATCCAGTTCACTCGTGGAACAAGGAAAACAGGGGAGGAGCATTTGTTCCATTTAAAGGAGTTAATTCTGAGATTTCATTTTCAAAAAATTCAGTGAAGGACTCCAAAGAAGTTTCACAGGTTCCTAGTCTTTCTCTGATGACTCCAATTTCAGAACTTAGTTCCAGCCACAAAAGGCACAATTGGAAAGGAAGTTCCGGGATATCTATGCTACCTGAGCCAATTAAAACTCATGGCCAACCTCAAGGTCAGCAGCAGCAACAGCAAGCTTCAAGGAAACAAAGGCGATGCTGGTCGCCTGAGTTGCATAGACGTTTTATCGATGCCCTTCAACAACTGGGAGGTGCACAAGTGGCCACTCCGAAGCAGATCAGAGAACTCATGCATGTCGATGGCTTGACAAACGATGAAGTGAAAAGCCATTTGCAAAAGTACAGGCTTCATGTTAGAAGATTCCCGCCCTCTTCAGATCCCCAAGCAAATGTTGTGCAGATGACCCAAGACCAATCTGCAGAGACATCAAAGACAACCTTATCACAATCTGGCTCTCCACAAGGTCCTCTCCTTCTAGGAGCCTCGGTGAGAGGACTCTCGAGCACTGGAGGTAACAGCTTAGATGGTGAAGAGGATGAGAATTCAATCGGCTATAGTTGGAAAGGTGGGCTTCACCAGCAAGGAGAAGTTGATGTACAGTCCTAA 1107 0.4444 MELSLDLSLTYVPRTISELLGDVSRTTIGAERLSKLEDFLRRLENEMRKIEAFKRELPLCMHLMNDAIERLKEQKVQYMKMQDQPAVKAFNPLKKSSVEVGAVDNCNDKKSWMSSAQLWSTDTRSTIEEDDRSVPENPVHSWNKENRGGAFVPFKGVNSEISFSKNSVKDSKEVSQVPSLSLMTPISELSSSHKRHNWKGSSGISMLPEPIKTHGQPQGQQQQQQASRKQRRCWSPELHRRFIDALQQLGGAQVATPKQIRELMHVDGLTNDEVKSHLQKYRLHVRRFPPSSDPQANVVQMTQDQSAETSKTTLSQSGSPQGPLLLGASVRGLSSTGGNSLDGEEDENSIGYSWKGGLHQQGEVDVQS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00952 368 MobiDBLite consensus disorder prediction 287 368 - -
Pte14g00952 368 NCBIfam myb-like DNA-binding domain, SHAQKYF class 229 284 IPR006447 GO:0003677
Pte14g00952 368 MobiDBLite consensus disorder prediction 191 233 - -
Pte14g00952 368 MobiDBLite consensus disorder prediction 214 231 - -
Pte14g00952 368 Coils Coil 33 56 - -
Pte14g00952 368 Coils Coil 64 84 - -
Pte14g00952 368 Pfam Myb-like DNA-binding domain 231 282 IPR001005 -
Pte14g00952 368 Gene3D - 228 285 - -
Pte14g00952 368 SUPERFAMILY Homeodomain-like 227 287 IPR009057 -
Pte14g00952 368 FunFam Myb family transcription factor 228 286 - -
Pte14g00952 368 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 355 IPR044787 GO:0003700|GO:0006355
Pte14g00952 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 286 IPR017930 -
Pte14g00952 368 MobiDBLite consensus disorder prediction 293 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00952 Pte-Chr14 31174925 31177930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00952 1 296 G2-like Transcription Factor Family AT2G03500 40.373 6.37e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte14g00952 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00952 - - qsa:O6P43_024686 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00952 14 31174925 31177930 Pte14g00952 14 31174925 31177930 RCT