Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00907 ATGATGCACAGGTGCAGTAGCTCTCATGGGAACATGATGGGGGCCTGTACTTGTGGTTCTTTCCACAGCCAAAGCAATTCATCCTGCATGTTGTTTTCCATGGCCAACCACAAACCCTATGATGAGTCTGACATGTATTATTACTACACGCCTTCTTCAACCTCTGTTGACTGCACACTTTCCCTTGGAACCCCATCAACTCGATACACAGAAGAGGAAGAGAGACGTAGCCGCCATGATCAACGTCGCTCTGGAAACTGTGTCTCCAACTTTTGCTGGGATTTACTTCAACCCAAAAACTCTTCTTATTCTCAATCCCACAGTAAGCCTAATCGTGGTACCAACTGTGTTAATTCCAACAATGACCCCCTCGTCGCTCGTCGCTGTGCAAACTGCGACACCACCTCTACTCCCCTTTGGAGAAATGGTCCAAGTGGCCCAAAGTCACTGTGCAATGCTTGTGGAATTAGATTCAAGAAGGAGGAGAGAAGAGCTAGTGCTGCCGGGACTACAATGGCGAGTAATGCTGCATCGTCAGGAGGAAATGTAATGGAGTTCAGCAACCAGAACAGTTCTTGGTATTCGAACACTCAGAATCAGAAGATGCCATGTCTTTCTCCGGCAATGGGCAATGAGTTTCATTTTGTCAATGACGGTGATCGCGATTCGGAGAACGGCATATCCTTCCTCTCTTGGCGGCTCAACGTCACTGACAGACCCTTCACCAGATGA 732 0.4795 MMHRCSSSHGNMMGACTCGSFHSQSNSSCMLFSMANHKPYDESDMYYYYTPSSTSVDCTLSLGTPSTRYTEEEERRSRHDQRRSGNCVSNFCWDLLQPKNSSYSQSHSKPNRGTNCVNSNNDPLVARRCANCDTTSTPLWRNGPSGPKSLCNACGIRFKKEERRASAAGTTMASNAASSGGNVMEFSNQNSSWYSNTQNQKMPCLSPAMGNEFHFVNDGDRDSENGISFLSWRLNVTDRPFTR* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00907 243 ProSiteProfiles GATA-type zinc finger domain profile. 123 159 IPR000679 GO:0006355|GO:0043565
Pte14g00907 243 SMART GATA_3 123 175 IPR000679 GO:0006355|GO:0043565
Pte14g00907 243 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pte14g00907 243 CDD ZnF_GATA 128 160 IPR000679 GO:0006355|GO:0043565
Pte14g00907 243 PANTHER GATA TRANSCRIPTION FACTOR 18 10 240 IPR044272 GO:0003700|GO:0009908
Pte14g00907 243 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 126 163 - -
Pte14g00907 243 Gene3D - 125 201 IPR013088 GO:0006355|GO:0008270
Pte14g00907 243 ProSitePatterns GATA-type zinc finger domain. 129 154 IPR000679 GO:0006355|GO:0043565
Pte14g00907 243 Pfam GATA zinc finger 129 163 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00907 Pte-Chr14 30796730 30797707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00907 17 244 C2C2-Gata Transcription Factor Family AT3G50870 41.812 9.10e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte14g00907 GATA 4.4e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00907 - - vvi:100247862 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00907 14 30796730 30797707 Pte14g00907 14 30796730 30797707 RCT