Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00903 ATGGGTTCTGATGCCTCAGAGGTAGCCAAGCCAATGGCAAACCGTTGCTCCTATAAGGTGCATCACGTAATCTGCATTGAACTAATGAAACTTGTGATGAGTGTTTCACGGATTATTCCAAACATAGAAGCAGCTAGGCCCCGATGCACCTCAGGTGTACAGGCATTATGCTTATTAAGCAACTCAATTGATAAAGCTGAGCTGCTGCTGCAATATTGCAGTGAATCTAGCAAACTATATCTGGCTCTTACAGGGGAGAAAATAGTCTTGAGATGTGAAAATGTAGTACATTTGATGGGACGAAGCTTAGGTGAACTTCAAAAAAATGTTCCTGTAACGTTAGCAGCTGAGATATCCCGAATGATTGATGAACTGAGAAGTGCAAGCTTCACCTTAGACACAGCAGAACATGAAGCTGGGAGGATTGTCAGAGAACTGCTACAGCAAGGTCCTGCTGATTCAGACTCAATGAAGAATTCTCTAATCAGAGATCTTCAATTTGTGGCACTAAAACTCCAGATTACATCCTCCAAGGATCTCTTGATTGAAAAAAGATCCATCAAGAAGTTGCTTGAAGTAGGTAAAACTGATACAAGAAAGAAGAATATCTTAATACACCTTCTTTCTTTGTTGAGTAAGTATGGGAAACATATAGTGAAGGAACAAGTTGAGAAAGCTGATGAATCTAATGAAGTACTAGTTGTCATGGAAAAACCCCGTCATGATTCCCTAGGGAGAAAGTCTGGTCAACAGGAAACACACATTGAACACCGGCAGTTGGATGCTCGCACCATTGAGTTGCGTAATAGAATTTTACCACCTGAGGAATTTAAGTGCCCCATATCCTTAAAACTGATGTATGACCCTGTTGTGATTGCTTCAGGACAAACATACGAAAGGATGTGGATACAGAAATGGTTTGATGAGGGCAATGACTGGTGTCCTAAAACTAAGATTAAACTGGCCCAACTATCATTGACTCCAAATGCAGTCATGAAGGACTTGATATCAAAGTGGTGTACAGACCATGAAGTCACTATTTGTGACCCCAGTGTGCAGCTAGAAGCTCTACGCTTGTGGGAAACATCCTCTGCATCCATTCCGAGCCTCGGCAGTTCTTTGAATGACTTGCACTTCCGTATGGATCTTAGTAACATTTCACTTGGGTCTATAGATGCTAAACACTGTTCAGATTCCTTACCTGGCATTACAGATGAAGTAGAAAATTTCATGCTGATGAAACGCAGTCATCAATCTCATCGAAGCATATCAGGGATTGATTCAGTCCTTCTGTCTAAAATTTCTGACCTCGAGTGGCATTCTAAATGTCAGCTTATTGAAGATGTCAAAAACCATTTCAAAAGTAATTATCATGCTTGTCAATCCGTGTCCTCCGAAAATTTTGTTGAACCGTTGATGAAATTTCTAGTGGATGCATATGATCTCCGTGACATTGAAGCTCAGAAAGCTGGTAATCAGTTGCTTTTGGAATTTGTGACCAACTGCAGAAATGATTTACTGTATTTGACTGAAGATGTATACAGTATAGTGGCAAGGTTTCTTGATACGGACGTAACAGAAGAAGCTATTGCTATAGTAGAAGCGTTGGCTGGCTACCAGCATAGCAGAGAGAAAGTTGCTACAACTGATACTCTGACTTTCATTGTAAAGGTCCTTGACTCAGGTAGCAGAGAACTGCAGCAAAGAGCTATTCAAAGTTTGTGTAATTTGTCATCGAACAGTGAAGTTTGTTCTCAATTGGTATCTCTTGATATTGTCTCAAAGTTGGTACAGTTCTTGAATGAGGGAAAGCTGGTGGGACAATGTACTTGTATAATGCAAAATCTTTGCATTGTTGAAGAAGGCCGGATTTCTGTGGTTCAAACTGATGGATGCATATCTTTTGTTGCTAAACTGCTTGAGAGTGACAGTCATGAGGACCAAGAACACGCACTGGCCATTTTAGTCTCTCTATGCTCTCAACGTGTTGAATACTGTGAGTTGCTCGTGGCTGAGTCCGTCATCCCTTCCCTTGCGAGTATATTCGTTAATGGAAATGACAAAGGAAAGGCTATGGCATCAGAATTGCTTTCGGCAATTGAGAGATATCAAATGTGA 2118 0.4089 MGSDASEVAKPMANRCSYKVHHVICIELMKLVMSVSRIIPNIEAARPRCTSGVQALCLLSNSIDKAELLLQYCSESSKLYLALTGEKIVLRCENVVHLMGRSLGELQKNVPVTLAAEISRMIDELRSASFTLDTAEHEAGRIVRELLQQGPADSDSMKNSLIRDLQFVALKLQITSSKDLLIEKRSIKKLLEVGKTDTRKKNILIHLLSLLSKYGKHIVKEQVEKADESNEVLVVMEKPRHDSLGRKSGQQETHIEHRQLDARTIELRNRILPPEEFKCPISLKLMYDPVVIASGQTYERMWIQKWFDEGNDWCPKTKIKLAQLSLTPNAVMKDLISKWCTDHEVTICDPSVQLEALRLWETSSASIPSLGSSLNDLHFRMDLSNISLGSIDAKHCSDSLPGITDEVENFMLMKRSHQSHRSISGIDSVLLSKISDLEWHSKCQLIEDVKNHFKSNYHACQSVSSENFVEPLMKFLVDAYDLRDIEAQKAGNQLLLEFVTNCRNDLLYLTEDVYSIVARFLDTDVTEEAIAIVEALAGYQHSREKVATTDTLTFIVKVLDSGSRELQQRAIQSLCNLSSNSEVCSQLVSLDIVSKLVQFLNEGKLVGQCTCIMQNLCIVEEGRISVVQTDGCISFVAKLLESDSHEDQEHALAILVSLCSQRVEYCELLVAESVIPSLASIFVNGNDKGKAMASELLSAIERYQM* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00903 705 PANTHER U BOX DOMAIN-CONTAINING 30 698 - -
Pte14g00903 705 SMART Ubox_2 276 339 IPR003613 GO:0004842|GO:0016567
Pte14g00903 705 Gene3D - 604 703 IPR011989 -
Pte14g00903 705 SUPERFAMILY ARM repeat 486 700 IPR016024 -
Pte14g00903 705 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 347 IPR013083 -
Pte14g00903 705 CDD RING-Ubox_PUB 274 326 IPR045210 -
Pte14g00903 705 SUPERFAMILY RING/U-box 273 349 - -
Pte14g00903 705 Gene3D - 440 603 IPR011989 -
Pte14g00903 705 Pfam U-box domain 274 344 IPR003613 GO:0004842|GO:0016567
Pte14g00903 705 ProSiteProfiles U-box domain profile. 272 346 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00903 Pte-Chr14 30763966 30767122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00903 17 700 U-box Gene Family AT4G36550 35.920 1.41e-129 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00903 - - qsa:O6P43_024773 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00903 14 30763966 30767122 Pte14g00903 14 30763966 30767122 RCT
Pte14g00903 14 30763966 30767122 Pte12g00433 12 3694125 3702556 RCT