Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00896 ATGTTGTCCAAAGGAGCCATGCCATCCCCATCTTCAATCTTCTCTGCCTATGCATCCATGAGTGCCTCAATAATGCTTATTCGTTCCATGACCAATGAACTCGTACCTCAACCGATTCGTGGCTACTTACTGAATACCTTCCGCTACTTCTTCAAGCCTCGCTCACAAACGTTCACCCTTGTAATTGAAGAGTTCGTAGGCATAGCACGTAATCAAGTCTACGATGCTGCAGAGATTTACTTGTGCACTAAGGTTAGTCCTGACACCGAAAGGCTCAAGATTAGCAAGACATCCAAGGATAGAAATTTCACCATTCGGCTTGAGAAGGGTGAGAAACTTGTTGATTTGTTCAAGGAGGTTGAGCTTAAATGGAGATTCATATGCGCCGAGTCTGATCAAAGGAATAGCAGTAATCCAAATGAGCATTCACTTCCAAGGCCTGAGAAGCGTTATTTTGAGCTAAGCTTTCACAAGAAGCATAAAGATTTGGTGTTGAATTACTACATGCCTTTCATTCTAGAGAGAGCGAAGGCCATGAAAGATCAAGAGAGGGTGTTGAAGATGCACACACTGAGCAGTTCCTATAGTTATGGAGGATGCAAATGGGACTCCATAAATCTCGAGCACTCTTCAACTTTTGAGACATTGGCGATGGAGCCAGAACAAAAGATTGCCATTTTGGAAGATTTGAACAGGTTTGTGAAGAGGAAGGAGTTTTACAAGAAAGTTGGGAGGGCGTGGAAACGAGGGTACTTATTGTATGGTCCTCCTGGAACTGGCAAATCTAGCTTGATTGCAGCCATGGCTAATTACTTGAAGTTTGATATCTACGACATGCAGCTTGCCAATGTTGTGAGAGATTCTGACCTCAGAAAGTTGCTTCTGTCCATCGCAAACAGATCAATACTCGTAATTGAAGATATTGATTGCAGTGTGGAGGTGCCTGATCGTCGAGTTGGGGATGGATCACGTAAGCAAACTGATGTACAGTTGACATTGTCTGGATTATTGAACTTCACAGATGGCTTATGGTCAAGTTGTGGAGATGAGAGGATCATCATATTCACAACCAACCACAAGGAAAGGCTAGACCCGGCTCTACTGAGACCTGGAAGGATGGACATGCACATTCATATGTCATATTGCACATATGAAGGGTTCAAGCTTTTGGCCTCAAATTATTTAGGAATCCCAAATCATCATCACCTTCCTGGAGAGATAGAAAGCATGATAGAGGAAGCTCAGATAACCCCTGCAGAAGTAGCAGAAGAGTTTATGAAGACTGAGGACACTGATGTTGCTCTCCAAGGAATTGTAAAGCTTCTCAAAAGGAAGAAAATGGAAGGTGATGTATGCGAGAACGACTTTGCAGAAAAAGATGCAGCCTGCAGAGAATCCAAGAGGAGGAAAACTGGGAACAAGCAGAAAAAATGTGTCAGAATCACCAGGAGAAATTGCAAAGTAAAAAGAATTTGA 1476 0.4289 MLSKGAMPSPSSIFSAYASMSASIMLIRSMTNELVPQPIRGYLLNTFRYFFKPRSQTFTLVIEEFVGIARNQVYDAAEIYLCTKVSPDTERLKISKTSKDRNFTIRLEKGEKLVDLFKEVELKWRFICAESDQRNSSNPNEHSLPRPEKRYFELSFHKKHKDLVLNYYMPFILERAKAMKDQERVLKMHTLSSSYSYGGCKWDSINLEHSSTFETLAMEPEQKIAILEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMQLANVVRDSDLRKLLLSIANRSILVIEDIDCSVEVPDRRVGDGSRKQTDVQLTLSGLLNFTDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCTYEGFKLLASNYLGIPNHHHLPGEIESMIEEAQITPAEVAEEFMKTEDTDVALQGIVKLLKRKKMEGDVCENDFAEKDAACRESKRRKTGNKQKKCVRITRRNCKVKRI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00896 491 CDD RecA-like_BCS1 226 379 - -
Pte14g00896 491 Gene3D - 201 377 IPR027417 -
Pte14g00896 491 SMART AAA_5 247 383 IPR003593 GO:0016887
Pte14g00896 491 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Pte14g00896 491 Pfam ATPase family associated with various cellular activities (AAA) 252 380 IPR003959 GO:0005524|GO:0016887
Pte14g00896 491 Gene3D - 378 449 - -
Pte14g00896 491 ProSitePatterns AAA-protein family signature. 351 369 IPR003960 GO:0005524|GO:0016887
Pte14g00896 491 PANTHER BCS1 AAA-TYPE ATPASE 15 447 - -
Pte14g00896 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00896 Pte-Chr14 30680233 30683373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00896 225 379 Calmodulin-binding Proteins AT3G56690 29.448 1.28e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00896 - - gmx:100789621 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00896 14 30680233 30683373 Pte14g00896 14 30680233 30683373 RCT