Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00889 ATGGCCGGCTTTTTCTCATTAAGTGAAGGAGGCAACAGAGGTAATCGTATCAACCAAGAGGAACAGCAGCACCGAATCGCGACAGAGATTCCTCAACCAGACAGTTTATTTTGGTACACAAACGAAGATGTAGGGGATAATGGGGGTTTCGAGCTATGGCAGCAGCATCAGCAGCTGCTTCTTCAACAGAGACAATTTCTCCACCAACAAGACCTTTACTCATCGGCCGTGGCCTTCGGAGTGGGACCCAGTGGAAGCTCAGTTAACTTCCAGGTTTCCAATGACCATTCATTGTCGAGATCGGCCTTCATGAACATGAGGTCTTCAAGTGCTTCGGGAGGGATAAGTTGTCAGGACTGTGGGAACCAAGCTAAGAAGGATTGCGTTCACATGCGGTGTAGGACTTGCTGCAAGAGCCGAGGATTAGACTGCCAGACTCATGTCAAAAGCACTTGGGCTCCGATTGCTAAACGCCGTGAGCGACAACAGAAACTACAGCAGCAGCTTCAACATCGTAGAGAGAATTCAAAACGACAGATAGACAATACTAGTGCCGATAAACCAAGTTCATCTCTTGCCCGCACTCAATCGGGCCACTTGGCCAACAACCCTTCCGGGTTAGTAGAGCTTGGGAATTTCCCAGCAGAGGTGAATTCTTCTGCGGTATTTCGATGTGTACGAGTGACATCAATTGATGACCCTGACGACCAATATGCTTATCAAACGGCTGTGAACATTGGAGGCCATCTTTTTAGGGGAATTCTCTATGATCAAGGCCCTGAAATTGAATACATGGCTCCGCAAGAAAGCTCCTCCGGTACTGTTGGTGAAGGAATCCAACCCTTGAATGTCACGGCTAATGTTGCTGATCCCAACAGCACTTCTACCTTGGGCACCAATGCAAGTGGTGATTGTGGAGGAGCTGTGGCAATGTCCCCTTCTGGGGTTCTGGTTGATCCTTCTTCTCTTTATCCACCTCCATTTAGCTCCTTCATGGCTGATGTGCAAATCTTCCCACAATCAAGGTCATGA 1032 0.4835 MAGFFSLSEGGNRGNRINQEEQQHRIATEIPQPDSLFWYTNEDVGDNGGFELWQQHQQLLLQQRQFLHQQDLYSSAVAFGVGPSGSSVNFQVSNDHSLSRSAFMNMRSSSASGGISCQDCGNQAKKDCVHMRCRTCCKSRGLDCQTHVKSTWAPIAKRRERQQKLQQQLQHRRENSKRQIDNTSADKPSSSLARTQSGHLANNPSGLVELGNFPAEVNSSAVFRCVRVTSIDDPDDQYAYQTAVNIGGHLFRGILYDQGPEIEYMAPQESSSGTVGEGIQPLNVTANVADPNSTSTLGTNASGDCGGAVAMSPSGVLVDPSSLYPPPFSSFMADVQIFPQSRS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00889 343 MobiDBLite consensus disorder prediction 167 200 - -
Pte14g00889 343 Coils Coil 159 186 - -
Pte14g00889 343 NCBIfam LRP1 C-terminal domain 213 260 IPR006511 -
Pte14g00889 343 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 329 IPR007818 GO:0003700|GO:0006355
Pte14g00889 343 Pfam Domain of unknown function (DUF702) 114 261 - -
Pte14g00889 343 NCBIfam putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Pte14g00889 343 MobiDBLite consensus disorder prediction 167 181 - -
Pte14g00889 343 MobiDBLite consensus disorder prediction 182 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00889 Pte-Chr14 30606788 30608759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00889 1 338 C2H2 Transcription Factor Family AT5G66350 48.739 9.21e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pte14g00889 DUF702 9.6e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00889 - - qsa:O6P43_033661 341.658