Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00881 ATGGATCGAAGCTATGGGTTTGATGATCATGATGCAGAGGAGATAAAGGAAAAGATGACAGGTGACAATTTCAGATCAAACAGTTCTGGCCTCAACAGAGAAGAGAGGAAATATCTCTCTCCAAAAAGTAGGGATTATGACTTGAATGACATTGGAACTGGGGTAAATGAGACATCAGCTGCCAGTTACGATCAAGCTGGAAGAAAATCTTCATTGGAGACAGAGATGATTATTGCAGCTCAAGGAACTAATTCCTCTGCCTGGGGTTCCAAATGTACTTTTGATTCCACATCAAAAACATTGCAGATGAATGAGGAGGTTGATTTTTTTGAGTTGCCCAGTCTCGATCCCATGCCAAATAATGTATTGAATAGTCATGCTTGTCAGAACAAAGAGTCTCCGTCAAGCTGGAGCACTGCTTCCAGTTTGGTGAGTGAGGTATCATATCCTGAAGCAGTTGCGTGTAGAGAGTATTCACCAATGCCTACCCAACTATCGGTTGAGGAATGGGATTCCAGCTTCGTCAGACCAAAGAAAATAGCTATTGACCATGTTGTTACTCCATCTTCGATAAGTTCTCAGCATCCTCAGTCTTCTCCCTCCAAACCAGCCTATAATGAGTCGAATTGGCAAGTAATAATTAATGATTCCAATGACTTCAGTTTTGATGAATCAGTTTCAGATCTGTTAGCTGAGGTAGAGGCAATGGAGTCCCGTGGTGGGGTAGATTCTCCTACATCAATCGTGAACTATGGAGAGGAGTTCACTGATGCATCCAAGAATGACTGTCTCAGTTCTGCAGAGAAACTTATCCCTTTGCCTGATCCTGGTAAAGGTGATGCAATGAGCTCCACGGCTGATGCTCAATTAACTATGTATTCTACTTCCACAAAAGAACAACACGTAGGAAACCCAGCAGACATACTTCAATGTCAAAGAATGACAGGTGCTCAATCTGGGGTTGGTGCAAGGAAGAATGATTCTTTTGTTCAGCAAAAGGAAGCAAGTGCCAATATGCCAGTTTCTGTACCATCCACCACAACCTGGGAGGTGACTGCCGTGGACATGCCTTGGAGATTGGGGTCAGACTTTGCAAGCACCATGTGGGGGACAGCTCAAGGAAATGTAAACTTGGGGTGGGGTAGTTTAGCAAATGGGAATTCAAACATGACTTTGGGGTTTGTTCAAGGTTCAATGCAGGAAAGTGGAGGAAGAATTAGTTCTTGCACAACCACAGGTAATCCTGGCATTTGGGGAAGCCAAACAAGAAGTACAAGTGACAGAATTTCTTCTTCTAAAGATCAGAACCTTCATGGAAGAGATTATGGTTGTGATTGGGGTAGAACTAATGGGAACAGGCAGCCAATCTCTGATATGGTAAATGAAACAGCTTCTCAAAGACATGCACCAAAAGGGCAAGCAACCTGTAAATATTATGAACGTGGTTTTTGCAATAAGGGAGGATCATGCAGTCATTGGCACCCATGA 1488 0.4321 MDRSYGFDDHDAEEIKEKMTGDNFRSNSSGLNREERKYLSPKSRDYDLNDIGTGVNETSAASYDQAGRKSSLETEMIIAAQGTNSSAWGSKCTFDSTSKTLQMNEEVDFFELPSLDPMPNNVLNSHACQNKESPSSWSTASSLVSEVSYPEAVACREYSPMPTQLSVEEWDSSFVRPKKIAIDHVVTPSSISSQHPQSSPSKPAYNESNWQVIINDSNDFSFDESVSDLLAEVEAMESRGGVDSPTSIVNYGEEFTDASKNDCLSSAEKLIPLPDPGKGDAMSSTADAQLTMYSTSTKEQHVGNPADILQCQRMTGAQSGVGARKNDSFVQQKEASANMPVSVPSTTTWEVTAVDMPWRLGSDFASTMWGTAQGNVNLGWGSLANGNSNMTLGFVQGSMQESGGRISSCTTTGNPGIWGSQTRSTSDRISSSKDQNLHGRDYGCDWGRTNGNRQPISDMVNETASQRHAPKGQATCKYYERGFCNKGGSCSHWHP* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00881 495 MobiDBLite consensus disorder prediction 29 44 - -
Pte14g00881 495 MobiDBLite consensus disorder prediction 1 21 - -
Pte14g00881 495 ProSiteProfiles Zinc finger C3H1-type profile. 470 495 IPR000571 GO:0046872
Pte14g00881 495 MobiDBLite consensus disorder prediction 403 442 - -
Pte14g00881 495 MobiDBLite consensus disorder prediction 1 55 - -
Pte14g00881 495 MobiDBLite consensus disorder prediction 403 432 - -
Pte14g00881 495 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 44 495 - -
Pte14g00881 495 SUPERFAMILY CCCH zinc finger 470 494 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00881 Pte-Chr14 30184090 30185784 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte14g00881 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00881 - - qsa:O6P43_033643 317.005