Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00870 ATGCGAACACTTTGTGACGCTTGTGAAAGCGCAGCTGCCATCGTCTTCTGCGCTGCTGATGAGGCTGCGCTCTGTCGTGCCTGTGATGAAAAGGTACACTTGTGTAATAAGCTTGCAAGTCGTCATGTAAGGGTGGGCCTTGCCAGTCCAAGTGACGTCCCTCGTTGTGACATATGTGAAAATGCACCTGCTTTCTTCTATTGCGAGACGGATGGAACTTCCCTTTGTTTGCAATGTGATATGATTGTCCATGTCGGAGGGAAAAGAACACACAGCAGATATCTTCTATTTAGGCAGAGAGTTGAGTTTCCAGGAGATAAACCTAGTCATGCTGATGATCCAACTTCACATCCCATGGATTCAAATGAGACCAAAAGAGGACAAAACCACATATCTAAATTGATAACTGGAGAGAACCAACAGAATCACATGATATCTACAGTTTCAGCATCAGAAGCTGATGCTGATGGGCACGCTCATATGGACACTAAAATGATTGATTTGAACATGAATCCGCAGCGGTTACATGAACAAACTTCCAATAATCAGGTAAAACCATCTTGGAAGTGA 570 0.4404 MRTLCDACESAAAIVFCAADEAALCRACDEKVHLCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGTSLCLQCDMIVHVGGKRTHSRYLLFRQRVEFPGDKPSHADDPTSHPMDSNETKRGQNHISKLITGENQQNHMISTVSASEADADGHAHMDTKMIDLNMNPQRLHEQTSNNQVKPSWK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00870 189 SMART bboxneu5 51 96 IPR000315 GO:0008270
Pte14g00870 189 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pte14g00870 189 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 170 - -
Pte14g00870 189 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Pte14g00870 189 Pfam B-box zinc finger 52 91 IPR000315 GO:0008270
Pte14g00870 189 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pte14g00870 189 FunFam B-box zinc finger protein 19 2 92 - -
Pte14g00870 189 MobiDBLite consensus disorder prediction 105 128 - -
Pte14g00870 189 CDD Bbox1_BBX-like 4 47 - -
Pte14g00870 189 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Pte14g00870 189 MobiDBLite consensus disorder prediction 105 127 - -
Pte14g00870 189 SUPERFAMILY B-box zinc-binding domain 48 88 - -
Pte14g00870 189 Gene3D Classic Zinc Finger 2 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00870 Pte-Chr14 30132735 30134954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00870 1 182 C2C2-CO-like Transcription Factor Family AT4G38960 63.187 1.43e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pte14g00870 zf-B_box 7.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00870 - - gmx:100780544 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00870 14 30132735 30134954 Pte2g01271 2 14433181 14434072 RCT
Pte14g00870 14 30132735 30134954 Pte14g00870 14 30132735 30134954 RCT
Pte3g01864 3 29692700 29693835 Pte14g00870 14 30132735 30134954 RCT