Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00862 ATGTACACTGGTCAGTTTGTCTACTGCGGGAAGAAGGCAACCCTTGTAGTCGGGAATGTCTTGCCAGTTAGATCCATTCCTGAAGGTGCTGTTGTTTGCAACGTTGAACACCATGTCGGTGACCGTGGAGTCTTTGCTCGGGCTTCTGGTGATTATGCTATTGTTATCAGCCACAACCCAGATAACGATACTACCAGGGTTAAGCTTCCATCCGGCGCAAAGAAAATTATTCCGAGTGGCTGCAGGGCTATGATTGGGCAGGTTGCAGGTGGAGGAAGAACAGAAAAGCCCCTTTTGAAAGCTGGTAATGCATACCACAAGTTTAGGGTTAAGAGGAACTGCTGGCCTAAGGTGCGTGGTGTTGCTATGAACCCAGTTGAGCATCCTCATGGAGGAGGTAACCACCAGCATATTGGTCATGCAAGTACTGTTAGGCGTGATGCTCCTCCTGGACAGAAGGTTGGTCTTATCGCTGCACGTAGGACTGGTCGGCTCCGTGGACAGGCTGCTGCTACTGCTGCTAAAGCTGACAAGAGTGCCTGA 543 0.5046 MYTGQFVYCGKKATLVVGNVLPVRSIPEGAVVCNVEHHVGDRGVFARASGDYAIVISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKSA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00862 180 Gene3D - 9 88 IPR014722 -
Pte14g00862 180 Pfam Ribosomal Proteins L2, C-terminal domain 17 144 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pte14g00862 180 ProSitePatterns Ribosomal protein L2 signature. 116 127 IPR022671 GO:0003735|GO:0005840|GO:0006412
Pte14g00862 180 SMART Ribosomal_L2_C_2 15 150 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pte14g00862 180 PANTHER RIBOSOMAL PROTEIN L2 1 174 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pte14g00862 180 FunFam 60S ribosomal protein L8 9 88 - -
Pte14g00862 180 MobiDBLite consensus disorder prediction 129 149 - -
Pte14g00862 180 SUPERFAMILY Translation proteins SH3-like domain 18 165 IPR008991 -
Pte14g00862 180 Gene3D Ribosomal protein L2, domain 3 89 167 IPR014726 -
Pte14g00862 180 FunFam 60S ribosomal protein L2 89 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00862 Pte-Chr14 30071881 30073687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00862 1 177 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 92.655 3.57e-124 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00862 K02938 - egr:104419669 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00862 14 30071881 30073687 Pte14g00862 14 30071881 30073687 RCT