Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00856 ATGAATCAGTACAAGCCTGAAGGTCTGTGCAAATCCCTGGTTGCTGGCGTGCCTGTTGGTTCAGAGATAGCTCCTTGTTCTGCTACACTTCATTCTCTTCCTCTTCCAGCTCCCATCTCTTCTAATCATCGTGCACGAAACGATAGCAGGCAGAAACATGGAGGAGAATTGCTCAATGCAGTTGCAGCAAGGAAAGTTCAGAAGGCAGATCGTGAAAAGCTCAGGAGAGATCGCTTAAATGAACAGTTTACTGAGTTGGGAAGCCTTTTAGATCCTGATTGGCCCAAGAATGACAAGGCAACCATCCTGGCAGACACAATTCTAGTGCTGAAGGATTTGAGTGCTGAAGTCAACAGACTTAAGGTTGAGTATGCAAAGCTCTCTGAAGAATCTCGAGAGCTAACGCAAGAGAAGAATGAACTCAGAGAAGAGAAGGCATCCTTAAAAACCGATATCAAATATCCTAATACCCAATATCAGCAAAGACTCAGTACTATGTTTCCATGGACTGCCATGGACCACTCTGTTGTCCTTGGTCCGCACTCATATCCAGTCCCCATGCCAGTCCCTCCGGGACCATTGCCCATACATCCATTGGTGCAGCCATTTTCATTTTATGGGAATCAAAATGCTGGTTCCATTACAACTTATGTCCCATATGCAGCTTCTGCTAATCACCCGGTTGAGCAGTCCTCTGCACATCATGCATCCACTTCCAATATATCAAGCAAGGAATATGCTATAAGCAGGTTGTCAAGTCATCAAAGATGCAGCAATGCTGAAACCTGTGACGAATCTGATGATGTTGCTACTGAGCTTGAGCTCAAGATGCCTGGATCATCAACACAACAGGATTCATCTTCTGTAGGAAGGAAGGGTAAGCACACGCCAAGAAAAGATAGAAATGCAGACGAAGGAAACAGTTCAAGTATGTATTCTTCATCTCAAGGTCTCCCAGATAGCTCCTCCAACAGTGTGGGTGACACCCCACAAGGCTAA 999 0.4535 MNQYKPEGLCKSLVAGVPVGSEIAPCSATLHSLPLPAPISSNHRARNDSRQKHGGELLNAVAARKVQKADREKLRRDRLNEQFTELGSLLDPDWPKNDKATILADTILVLKDLSAEVNRLKVEYAKLSEESRELTQEKNELREEKASLKTDIKYPNTQYQQRLSTMFPWTAMDHSVVLGPHSYPVPMPVPPGPLPIHPLVQPFSFYGNQNAGSITTYVPYAASANHPVEQSSAHHASTSNISSKEYAISRLSSHQRCSNAETCDESDDVATELELKMPGSSTQQDSSSVGRKGKHTPRKDRNADEGNSSSMYSSSQGLPDSSSNSVGDTPQG* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00856 332 CDD bHLH_AtILR3_like 68 142 - -
Pte14g00856 332 Pfam Helix-loop-helix DNA-binding domain 64 113 IPR011598 GO:0046983
Pte14g00856 332 Coils Coil 110 151 - -
Pte14g00856 332 SMART finulus 69 119 IPR011598 GO:0046983
Pte14g00856 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 133 IPR036638 GO:0046983
Pte14g00856 332 PANTHER TRANSCRIPTION FACTOR BHLH121 40 330 IPR044579 GO:0003700|GO:0006879
Pte14g00856 332 MobiDBLite consensus disorder prediction 276 290 - -
Pte14g00856 332 Gene3D - 61 162 IPR036638 GO:0046983
Pte14g00856 332 MobiDBLite consensus disorder prediction 276 332 - -
Pte14g00856 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 113 IPR011598 GO:0046983
Pte14g00856 332 MobiDBLite consensus disorder prediction 306 332 - -
Pte14g00856 332 MobiDBLite consensus disorder prediction 291 305 - -
Pte14g00856 332 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00856 Pte-Chr14 30047521 30050459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00856 61 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 50.813 6.93e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte14g00856 HLH 2.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00856 - - csv:101222613 358.607