Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00836 ATGGAATTTTGGTCACACCCAACTGCTTTGTTTTCATATTCATCTTCTGTCCTTGGGAATTTTGTTGGAAGAGTGAAACAAGTCTATAATTTTGCTGTTTCAGCAATCATTGGGACCGTTTTCTCTGCGATCTTGACATTCTGTTTTGCGTTAGTGGGAACTCTCCTAGGAGCTATGACCGGAGCTTTAATTGGCCAAGAAACTGAGAGTGGTTTCATTAGAGGTGCTGCTGTTGGTGCTATATCAGGAGCTGTTTTTTCAATTGAAGTATTTGAATCGTCTCTTATTCTCTGGCAGTCTGACGAATCTGGCATCGGGTGCCTTCTCTACTTGATTGATGTTCTTGCAAGCCTTCTAAGTGGGAGGTTAGTACGTGAGAGGATAGGTCCAGCTATGTTAAGTGCCGTGCAGAGTCAGATGGTTGCTGTCGAAACAAGCTTTGATGAAGTACACACCATTTTCGACATTGGTGGGGCAAAAGGGTTACCAGGCGATTTAGTTGACAAAATCCCAAAAATCAGAATTACAAGTGAAAACAATGGTGACGCTTCCGGTGAAAATGCTTCTTGCTCAGTTTGCCTCCAGGATTTTCAACTTGGAGAGATGGCTAGAAGTTTGCCTCATTGCCGCCACATGTTCCACCTGCCTTGCATAGATAAATGGCTTTTCAAGCATGCTTCTTGTCCATTGTGCAGAAGGGATCTGTAA 708 0.4336 MEFWSHPTALFSYSSSVLGNFVGRVKQVYNFAVSAIIGTVFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLILWQSDESGIGCLLYLIDVLASLLSGRLVRERIGPAMLSAVQSQMVAVETSFDEVHTIFDIGGAKGLPGDLVDKIPKIRITSENNGDASGENASCSVCLQDFQLGEMARSLPHCRHMFHLPCIDKWLFKHASCPLCRRDL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00836 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 20 234 IPR044523 -
Pte14g00836 235 ProSiteProfiles Zinc finger RING-type profile. 190 232 IPR001841 -
Pte14g00836 235 SUPERFAMILY RING/U-box 184 235 - -
Pte14g00836 235 SMART ring_2 190 231 IPR001841 -
Pte14g00836 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 235 IPR013083 -
Pte14g00836 235 FunFam NEP1-interacting protein-like 1 150 235 - -
Pte14g00836 235 Pfam Ring finger domain 189 232 IPR001841 -
Pte14g00836 235 CDD RING-H2_NIPL1-like 189 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00836 Pte-Chr14 29818204 29821161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00836 24 236 C3H Transcription Factor Family AT5G66070 76.526 4.54e-115 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00836 - - qsa:O6P43_033568 402.519