Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00825 ATGGCTAAGAGATCATTCATTAACATGGAGGACGAGGACGACGAAGAAGAAGAAGAGGAGGAGACTGAAAGTGAGTATGATGATTGTGGCGGTGATGGTGATGATAGGAGGAAGAAGGTAATGGTAAGGCTAGTGTGTGCGAGGCCTCATCAGAGTCAGGTACAGGGGATGAGAGAACCATCTGCTAAGATGAGACTATCGTCCTCAACGTGTTGTCAAGCAGACGAATGCGGTACCAACTTGAGAATGGAGAAGGTTTATCACCAGAAACACAAGGTCTGTGAGCGACACTCTAAGGCTCCTGTGGTTTTGGTCAATGGTATTCGCCAGAGGTTCTGCCAGCAGTGTAGCAAGTTTCATGAAATTTCAGAGTTTGACCACATGAAAAGAAGCTGTAGGCAAAAACTGGCAGGTCATAACGAGCGTCGTAGAAAGAGCCAATTAGATATGCAGGTAGAGAGCAGAGAGAAGCCACACTCATCTCAAACCCCACTGTCCTTTTAA 504 0.4643 MAKRSFINMEDEDDEEEEEEETESEYDDCGGDGDDRRKKVMVRLVCARPHQSQVQGMREPSAKMRLSSSTCCQADECGTNLRMEKVYHQKHKVCERHSKAPVVLVNGIRQRFCQQCSKFHEISEFDHMKRSCRQKLAGHNERRRKSQLDMQVESREKPHSSQTPLSF* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00825 167 MobiDBLite consensus disorder prediction 136 156 - -
Pte14g00825 167 MobiDBLite consensus disorder prediction 136 167 - -
Pte14g00825 167 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
Pte14g00825 167 MobiDBLite consensus disorder prediction 10 29 - -
Pte14g00825 167 Gene3D - 63 133 IPR036893 GO:0003677|GO:0005634
Pte14g00825 167 SUPERFAMILY SBT domain 70 151 IPR036893 GO:0003677|GO:0005634
Pte14g00825 167 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 34 147 IPR044817 GO:0003677
Pte14g00825 167 MobiDBLite consensus disorder prediction 1 35 - -
Pte14g00825 167 Pfam SBP domain 72 145 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00825 Pte-Chr14 29751504 29753002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00825 67 149 SBP-box Gene Family AT2G33810 60.241 2.00e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte14g00825 SBP 5.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00825 - - qsu:112040672 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00825 14 29751504 29753002 Pte14g00825 14 29751504 29753002 RCT