Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00819 ATGGGAGGAGGTGACGGTACCGTGGAAGAAATCAAGGAAACTACCGGCGGTGTCAAGGTCGCCGTCAACATCCGATGTTCTAACGGGTCGAAATTTTCTGTTCAGATTAGTCTCGACTCTACTGTTGGGTCCTTCAAAGACGCAATTGCCCAGAACTGCGATATCCCTGCCGACCAGCAGCGTCTGATTTATAAGGGTCGGATCTTGAAGGACGATCAAACCCTAACTAGCTATGGTTTGGAAGCAGATCATACTGTCCATTTGGTTCGTGGTTTTGCTCCTGCTGCTCCGCTAGCCAATGCAACTGCTGGAGCCAATCCTACAGGCACAGCAGCAACTCCAAACAATGCCAGGACTGCTGGATCTAACGAAGATGTGGGATTAGGAGGCCCAAATCTTGGAGCTTCTCTATTTCCTGGACTTGGTTTAGGTGGCATTGGTAGTGGTAATAATTTATTTGGATCTGGACTTCCAGATTTTGAGCAAGTGCAGCAACAGTTGAGTCGGAACCCAAATATAATGAGGGAAATAATGAACATGCCTGTTATTCAGAATCTCATGAATAATCCTGAAGTAATGCGGAATATGGTTATGAATAATCCTCAAATGCGGGAAATCATTGATCGCAATCCCGAGCTAGGACATATACTTAATGATCCTAGCACTTTGCGCCAAACACTGGAAGCTGCTAGGAATCCTGAGCTCATGCGTGAGATGATGCGAAATACTGATAGAGCAATGAGCAATATTGAATCATCTCCTGAGGGATTCAACATGTTGAGGCGTATGTATGAAAATGTTCAAGAGCCATTCCTAAATGCTACAACCATGGCTGGAAATCAAGGGAATGGAAACTCTAACCCTTTTGCAGCACTTCTGGGAAACCAAGGTGGCCAGACCAGAGATCAAATGACAAACCCATCAACCACTAGTTCGGAAGCTACAGCTGGTTCTCCATCTCCCAATACCAATCCACTTCCAAATCCTTGGTCATCTACTGGCCCACCTGGAGGTGCTCCAACCAACCCCACAAGATCAACATCTGTTACGGACACAAGGCAACAGGCACCGACTGGCTTAGGGGGAGTTGGCCTTCCGGAGCTTGAAGGTTCCTTGCTAGATCCTAATGCGATGACTCAGTTACTGCAAAATCCTGTCGTTTCCCAAATGATGCAAAGCCTCCTTTCTAACCCCCAGTATATGAACCAGATTCTTGGCATGAACCCTCAGCTTAGCAGCATGCTTGATTCAAACTCTCAATTGAGAGAAATGATGCAAAACCCAGAAATTCTTCGTCAACTAACATCGCCTGAGACAATGCAGCAACTCTTGTCATTCCAGCAAGCGTTACTGTCTCAGATAAACCGAGGACAGTCTGCACAAGATCCTGGTCAGACTGGTGGAGGTGCAGGATCATTGAACAGCTCTGGGATGGAGATGTTGATGAATATGTTTGGTGGACTTGGGGCTGGAAGCTTAGCTGGTCCAAACAGATCGAATGTGCCTCCGGAGCAATTGTATGCAACACAGTTGACACAACTTCAAGATATGGGCTTCTTTGACACACAAGAGAACGTACGGGCTCTTATTGCCACTGCTGGAAATGTTCATGCTGCCGTTGAGCGTCTTTTGGGGAACAATGGTCAGTAG 1650 0.4667 MGGGDGTVEEIKETTGGVKVAVNIRCSNGSKFSVQISLDSTVGSFKDAIAQNCDIPADQQRLIYKGRILKDDQTLTSYGLEADHTVHLVRGFAPAAPLANATAGANPTGTAATPNNARTAGSNEDVGLGGPNLGASLFPGLGLGGIGSGNNLFGSGLPDFEQVQQQLSRNPNIMREIMNMPVIQNLMNNPEVMRNMVMNNPQMREIIDRNPELGHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNQGNGNSNPFAALLGNQGGQTRDQMTNPSTTSSEATAGSPSPNTNPLPNPWSSTGPPGGAPTNPTRSTSVTDTRQQAPTGLGGVGLPELEGSLLDPNAMTQLLQNPVVSQMMQSLLSNPQYMNQILGMNPQLSSMLDSNSQLREMMQNPEILRQLTSPETMQQLLSFQQALLSQINRGQSAQDPGQTGGGAGSLNSSGMEMLMNMFGGLGAGSLAGPNRSNVPPEQLYATQLTQLQDMGFFDTQENVRALIATAGNVHAAVERLLGNNGQ* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00819 549 Gene3D - 8 103 - -
Pte14g00819 549 MobiDBLite consensus disorder prediction 337 357 - -
Pte14g00819 549 ProSiteProfiles Ubiquitin domain profile. 20 89 IPR000626 GO:0005515
Pte14g00819 549 FunFam Ubiquitin domain-containing protein DSK2b 17 104 - -
Pte14g00819 549 SMART uba_6 507 545 IPR015940 -
Pte14g00819 549 MobiDBLite consensus disorder prediction 277 367 - -
Pte14g00819 549 Gene3D - 489 549 - -
Pte14g00819 549 SMART CBM 408 443 IPR006636 -
Pte14g00819 549 SMART CBM 150 196 IPR006636 -
Pte14g00819 549 SMART CBM 374 404 IPR006636 -
Pte14g00819 549 SMART CBM 200 239 IPR006636 -
Pte14g00819 549 SUPERFAMILY UBA-like 503 545 IPR009060 GO:0005515
Pte14g00819 549 CDD Ubl_Dsk2p_like 20 92 - -
Pte14g00819 549 Pfam UBA/TS-N domain 507 543 IPR015940 -
Pte14g00819 549 SUPERFAMILY Ubiquitin-like 20 107 IPR029071 -
Pte14g00819 549 MobiDBLite consensus disorder prediction 277 321 - -
Pte14g00819 549 FunFam Ubiquitin domain-containing protein DSK2b 490 548 - -
Pte14g00819 549 CDD UBA_PLICs 507 545 - -
Pte14g00819 549 PANTHER UBIQUILIN 20 544 IPR015496 -
Pte14g00819 549 SMART ubq_7 20 91 IPR000626 GO:0005515
Pte14g00819 549 MobiDBLite consensus disorder prediction 322 336 - -
Pte14g00819 549 FunFam Ubiquitin domain-containing protein DSK2b 197 253 - -
Pte14g00819 549 Gene3D - 193 253 - -
Pte14g00819 549 Pfam Ubiquitin family 22 89 IPR000626 GO:0005515
Pte14g00819 549 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 501 546 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00819 Pte-Chr14 29712641 29717499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00819 24 89 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 33.333 4.44e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00819 K04523 - qsa:O6P43_024949 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00819 14 29712641 29717499 Pte14g00819 14 29712641 29717499 RCT