Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00817 ATGGATTCCTCTTCGACCCGTTCACTTACAACTCTATTAGTCTTCAAGAACACCATCAACTCAGAGTTGATCAGAAGCTTGCATGCTTATCGATTGAAAGATGGCAAGGAACTTGTAATGGAGAGAGAGTTTTTCTTTTCCGAGACAGGACCTTATGTAGAAATGCCAGCTAGCCCACTTCTTAGATTGGAGAAATTTCGTGTCGCTGAAGTGTGTGGTGGTCATGTCAATGGTGTGTGGTTTTGTATATTTGCCTTTCATGCTGATCATGTACCTGACTTCTCCAGCATCCCTTCATTGTTATTGCTCTCAAGAAATCCGAAGCTGAAGACAATATCAAGATTGGCAGATGAGCTCCAAATTATTTTTGAGTTGGTCCGTCAGAAGGAAGATCCTAGCACACCCAAAAGTCTAAAGGAGGATTCATGCAAAGAGAAGAGTAACAATCGGTACCGACCAAGAAGGATTTCTCCTGCACTAAATCAGGATCTTAATTGTCTTCCTTATACAGTCAGCAGACCAGAACAAATTAAGGATAACCAAGCTGAATCATATTTGCCAGGTACCGTTGAGAAAAAGAATAAGAGGGCAGCTAGTGAACGCATAGCAAGACTTGCGTTATCAGATCTTGTCATGTACTTTGATCTGCCAATAGCAGAAGCTTCAAGAAATTTAAAAGTTGGTCTTACTGTACTAAAGAGGAAGTGTAGAGAGCTCGGTATTCCTCGCTGGCCACATAGGAAGATCAAATCTCTTGACAATCTCATTCGCGATCTTCAGGAAGAAGCAAAACGTCAACAAAAGGAGAATAAGGCTGCAGCTATGGCAGTGGCGAAGAGGCAGAGGTTGTTGGAGAGTGAAAAAGAACGTATAGAGAGGAAACCCTTCATGGAGATACAAACAGAGACCAAGAGATTCAGACAAGATGTCTTCAAGAGAAGGCACAGAGCTAGGTCCCTCAAGAAGCAGGGCTCAACCAGCAATGATAAAGAATCAACAGCTGTTGGGGAGTGA 1014 0.426 MDSSSTRSLTTLLVFKNTINSELIRSLHAYRLKDGKELVMEREFFFSETGPYVEMPASPLLRLEKFRVAEVCGGHVNGVWFCIFAFHADHVPDFSSIPSLLLLSRNPKLKTISRLADELQIIFELVRQKEDPSTPKSLKEDSCKEKSNNRYRPRRISPALNQDLNCLPYTVSRPEQIKDNQAESYLPGTVEKKNKRAASERIARLALSDLVMYFDLPIAEASRNLKVGLTVLKRKCRELGIPRWPHRKIKSLDNLIRDLQEEAKRQQKENKAAAMAVAKRQRLLESEKERIERKPFMEIQTETKRFRQDVFKRRHRARSLKKQGSTSNDKESTAVGE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00817 337 MobiDBLite consensus disorder prediction 132 152 - -
Pte14g00817 337 Coils Coil 249 276 - -
Pte14g00817 337 MobiDBLite consensus disorder prediction 311 337 - -
Pte14g00817 337 ProSiteProfiles RWP-RK domain profile. 189 272 IPR003035 -
Pte14g00817 337 PANTHER PROTEIN RKD4 161 329 IPR044607 GO:0003700
Pte14g00817 337 MobiDBLite consensus disorder prediction 132 154 - -
Pte14g00817 337 Pfam RWP-RK domain 205 252 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00817 Pte-Chr14 29688497 29691845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00817 19 322 AtRKD Transcription Factor Family AT4G35590 50.155 6.65e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pte14g00817 RWP-RK 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00817 - - rcu:8281307 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00817 14 29688497 29691845 Pte14g00817 14 29688497 29691845 RCT