Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00802 ATGGGTCGCCTAGTAAGAATTCTGCAAGCCCCCACCACCACCGTTAGAAGTAGTGGCGGTGACCATTCAACGACAGCAGCAACAAGCAACACAGCGGAATCAGTACCAGCGCCGCCACCGGAAGCTGTGACATTGGAGTCAGATTTTGTGGTAATTCTGGCAGCTCTTCTTTGTGCTCTTATAGGCGTGGTCGGGCTAATTGCTGTGGCACGGTGCTCTTGCCTTCGACGTGGCGGCGGCGGGGTATCTCAAACTCGAACTCCGGCCAACAAAGGCCTTAAGAAGAAGGTGCTTCAGTCTCTTCCAAAATTCACTTACATCAGCAGCAGCAATGATGGCGGCGGCGGCGGCAGCAGCAATAACAACTGCAGCAAAAAGTGGATGGTTACATCAGATTGTGCCATATGCTTGGCTGAGTTCCAGGAAGGAGATGAGATCCGAGTGTTGCCTCAGTGTGGCCATGGTTTTCATTTGGGGTGTATAGACGCATGGCTTGTGTCACACTCCTCTTGCCCTTCTTGCAGACAAATTCTTGTTGTACCTAGGTGTCAAAAGTGTGGACTTTATCCTGCTATTGCTGGCAACGGCAACGGCGGAGGCGGCGGATTGGTGGTTATTACAGTTGATGAGAGTGAAATGAAGGCCGGAGAAGCTGGCAATGCGAATGAAGTTAGTGCAACTGGTGAGGGTCAGCATCAAGCTGATAATGACAATGGTGAAAATACAAATAGTATTGCTAATGACAATCATATTGGCAACAGTACTACTTTCTTGCCTTAG 780 0.4974 MGRLVRILQAPTTTVRSSGGDHSTTAATSNTAESVPAPPPEAVTLESDFVVILAALLCALIGVVGLIAVARCSCLRRGGGGVSQTRTPANKGLKKKVLQSLPKFTYISSSNDGGGGGSSNNNCSKKWMVTSDCAICLAEFQEGDEIRVLPQCGHGFHLGCIDAWLVSHSSCPSCRQILVVPRCQKCGLYPAIAGNGNGGGGGLVVITVDESEMKAGEAGNANEVSATGEGQHQADNDNGENTNSIANDNHIGNSTTFLP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00802 259 CDD RING-H2_EL5-like 132 175 - -
Pte14g00802 259 SMART ring_2 133 174 IPR001841 -
Pte14g00802 259 MobiDBLite consensus disorder prediction 224 259 - -
Pte14g00802 259 SUPERFAMILY RING/U-box 132 181 - -
Pte14g00802 259 MobiDBLite consensus disorder prediction 221 259 - -
Pte14g00802 259 Pfam Ring finger domain 132 175 IPR001841 -
Pte14g00802 259 MobiDBLite consensus disorder prediction 14 39 - -
Pte14g00802 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 179 IPR013083 -
Pte14g00802 259 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Pte14g00802 259 MobiDBLite consensus disorder prediction 14 35 - -
Pte14g00802 259 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 37 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00802 Pte-Chr14 29588646 29589981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00802 45 186 C3H Transcription Factor Family AT1G20823 62.092 2.48e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00802 - - adu:107487390 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00802 14 29588646 29589981 Pte14g00802 14 29588646 29589981 RCT
Pte14g00802 14 29588646 29589981 Pte12g00566 12 5065817 5066916 RCT