Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00798 ATGAGTTATGTCAATGAAAATGAAGAATCTGGCCAAGTCGTGACAGTGCCTATGGATGAAGACCAAAAGTTAGATGATACACAAATTCAAGCGCGTGACGACCCTGCACCTCCATTGCTTGTGGAGGAGGCTTCAAATGGCACTGGCAATGAGAAGGTAATGGCAGAACCCGAGGATATGAAGATGGAAGTTGACGTTCTTTCAAAGCCTGTTTCTGAATCAGCAGATCAAAATTCTCTTCAGTCAGTCCCGGTGAGAGATACCACTCAAAAGTCGCTTCGACCTGAAGGTCAAAACACTCCTGATGTAAAAACTGTGGTGGATGACGCTAATATAAACGATGCATGTAATCAAGCCGATAAGGGCATCCAGGGCAATCATCTAGATGAAGCTAAGAAAAGGAACGACGTTGAGGAATCTGACAAAGTCAACCAGGGTGATAAAGCTCGTGAATCTGATGAGGGGAATGAAGCTCAGAAAGTTTATCACACCAGTGAAGCCGATGGGACTCAACAAGTCAGTCAGCTTGATGAAGCCCCTGAAGCCAATCTATCCTGTGAAGCCAGTGGGGTTAATGAATCTAGTCAAACCAGTGGAACTATTGAGGTAAAAGAATTACCTGAAAAGGATGTATCTAAGGAGAGTAACATGGATAAGCATGATAATACTAAACCTGCCTCTGATATTAAGATGGAAGACACTGAAGAAACCGAGGATCAAGAGAAACTTGGTAGCAACTCTGTACCTACATGGCAGAGTGACCCTTCGACTCCTGAAGCTGTTCCTTCTGATACCAAAGACGTAAAGGAAAACCATGCAGAAGCAAAGAATGAGTTTGTCGGGAATGAGAAGAAAGTTGTTAGTGAGGTGGAAAATGAAAATGAGCGAGGGAATACTCCTTCAGAGAATAACAATCACGCTAATACGCCTGCAGAGAATGGTACCTCGGCCTTGAAGCATTCTTTCTTAGATGATGATCATGCAAATGGCGGCTATGAGTCAGGAACTGAGGAGAAGCAATCAGCTTTCATGAAGGAGCTTGAAAATTTCTTTAGGGAGAAATGCATGGAATTCAAGCCTCCTAAGTTCTACGGAGAGGGTCTAAATTGCCTCAAGTTATGGAGAGCTGTGATGAGATTAGGTGGTTATGATAAGGTTACTTCTTGTAAATTATGGCGGCAAGTGGGAGAGTCCTTCAAACCACCCAAGACTTGTACAACAGTTTCCTGGACATTTCGTGGCTTCTACGAGAAGGCACTTCTTGAATATGAGCGGCATATGACACGAGGTGGTGAAATTGTGGTTGCTCCTGTTGCCTCTCCCTCTGAACCTATAAGTAATGAACAACAGACTCCAGGATCAGGTAGAGCGAGGAGGGATGCAGCAGCACGAGCCATGCAAGGTTGGCATTCACAACGCCTTCTTGGTAATGGTGAAGTTAGTGATCCTATAATAAAGGATAAGAATTCTATACCCCTGCAGAAACGGAAGAAGGAACTTAAAAGCTTCAGTTTACTTAAGCGTAAGAAACCACCTTATTTGGACAATGCGATCAAGGCAGTACGTAGCAAACCTTCTAAACCACAGTTGGACACTGCAGTTATAGATATTGGACCACCTGCTGATTGGGTGAAGATAAATGTGCAAAAGACCAAAGATTGTTTTGAGGTCTACGCTTTGGTTCCAGGGCTTCTTCGTGAAGAGGTTCGTGTCCAATCAGACCCAGTTGGACGTCTGGTGATAACTGGTGCACCTGAGCAGCTTGATAATCCATGGGGGGTGACCCCCTTCAAAAAGGTCGTCACTTTGCCTTCAAGAATTGATCCGCATCAGACTTCAGCTGTGGTCACCTTGCACGGTCAGTTGTTCGTCCGGGTACCCTTTGAGCAGTCGGAGTAG 1899 0.4471 MSYVNENEESGQVVTVPMDEDQKLDDTQIQARDDPAPPLLVEEASNGTGNEKVMAEPEDMKMEVDVLSKPVSESADQNSLQSVPVRDTTQKSLRPEGQNTPDVKTVVDDANINDACNQADKGIQGNHLDEAKKRNDVEESDKVNQGDKARESDEGNEAQKVYHTSEADGTQQVSQLDEAPEANLSCEASGVNESSQTSGTIEVKELPEKDVSKESNMDKHDNTKPASDIKMEDTEETEDQEKLGSNSVPTWQSDPSTPEAVPSDTKDVKENHAEAKNEFVGNEKKVVSEVENENERGNTPSENNNHANTPAENGTSALKHSFLDDDHANGGYESGTEEKQSAFMKELENFFREKCMEFKPPKFYGEGLNCLKLWRAVMRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLEYERHMTRGGEIVVAPVASPSEPISNEQQTPGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSIPLQKRKKELKSFSLLKRKKPPYLDNAIKAVRSKPSKPQLDTAVIDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPVGRLVITGAPEQLDNPWGVTPFKKVVTLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00798 632 FunFam AT-rich interactive domain-containing protein 3 337 436 - -
Pte14g00798 632 SMART bright_3 338 429 IPR001606 GO:0003677
Pte14g00798 632 MobiDBLite consensus disorder prediction 203 242 - -
Pte14g00798 632 FunFam AT-rich interactive domain-containing protein 3 524 632 - -
Pte14g00798 632 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 168 631 IPR045147 GO:0006357
Pte14g00798 632 MobiDBLite consensus disorder prediction 125 161 - -
Pte14g00798 632 Pfam ARID/BRIGHT DNA binding domain 340 424 IPR001606 GO:0003677
Pte14g00798 632 MobiDBLite consensus disorder prediction 1 339 - -
Pte14g00798 632 MobiDBLite consensus disorder prediction 440 459 - -
Pte14g00798 632 MobiDBLite consensus disorder prediction 187 202 - -
Pte14g00798 632 MobiDBLite consensus disorder prediction 297 316 - -
Pte14g00798 632 Gene3D - 337 433 IPR036431 GO:0003677
Pte14g00798 632 CDD ACD_sHsps_p23-like 551 627 - -
Pte14g00798 632 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 532 632 IPR002068 -
Pte14g00798 632 SMART ARID_2 334 424 - -
Pte14g00798 632 MobiDBLite consensus disorder prediction 243 260 - -
Pte14g00798 632 ProSiteProfiles ARID domain profile. 337 428 IPR001606 GO:0003677
Pte14g00798 632 MobiDBLite consensus disorder prediction 319 339 - -
Pte14g00798 632 MobiDBLite consensus disorder prediction 263 296 - -
Pte14g00798 632 Pfam Hsp20/alpha crystallin family 549 631 IPR002068 -
Pte14g00798 632 SUPERFAMILY HSP20-like chaperones 541 628 IPR008978 -
Pte14g00798 632 CDD ARID 342 424 - -
Pte14g00798 632 Gene3D - 536 632 IPR008978 -
Pte14g00798 632 SUPERFAMILY ARID-like 333 434 IPR036431 GO:0003677
Pte14g00798 632 MobiDBLite consensus disorder prediction 163 179 - -
Pte14g00798 632 MobiDBLite consensus disorder prediction 71 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00798 Pte-Chr14 29494448 29503218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00798 282 630 ARID Transcription Factor Family AT1G76510 60.000 2.20e-132 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pte14g00798 HSP20 3.6e-05 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00798 - - pcin:129284429 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00798 14 29494448 29503218 Pte14g00798 14 29494448 29503218 RCT