Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00790 ATGAGCTTCCCCACTATGGTCTTAAAGTGGGTCTTACTAACTATGCTGCAGGTAATTCAATTGGAATATTGTATCCTGTCCTTTTTCCGTTTAAGTGATCTGACTCTCTGGTGCTGTATGCTAATAATGCTGTCAGCATATTGTACTGGTCTTCTTCTTGCCCGGCGTGTCTTGAAGAAGCTTGAAATGGATGATGAATATGAAGGGAATGTTGAGGCTACTGGAGAAGATTTCTCAGTCGAACCAACAGAGAACAGACGGCCATTCAGAGCACTTCTTGATGTTGGTCTTATCAGGACAACAACTGGAAACCGTGTTTTTGGTGCCCTCAAGGGAGCCTTGGATGGAGGCTTGGATATCCCCCACAGTGAGAAAAGATTTCCAGGTTTTGCAAAGGAGGGAAAACAGCTTGATGCTGATGTCCACCGTAAATACATATATGGTGGCCATGTTGCAGCATACATGAAGTCTCTTCAGGAGGATGAGCCTGAGAAATACCAATCTCACTTCAGTGAATACGTCAAGAATGGAGTTGATCCCGATGGAATGGAGGAGCTCTACAAGAAAGTTCATGCTGCTATACGTGCTGATCCTTTGGAGAAGAAAACTGAGAAGCAGCCACCCAAAGAACACAAGAGATACAACTTGAAGAAGCTCACTTATGAAGAAAGGAAAGCCAAACTCATTGAGCGCCTGCAGTCGCTCAATGCTGCTGCTGGAGCAGATGATGATGATGACGAATGA 744 0.4462 MSFPTMVLKWVLLTMLQVIQLEYCILSFFRLSDLTLWCCMLIMLSAYCTGLLLARRVLKKLEMDDEYEGNVEATGEDFSVEPTENRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSEKRFPGFAKEGKQLDADVHRKYIYGGHVAAYMKSLQEDEPEKYQSHFSEYVKNGVDPDGMEELYKKVHAAIRADPLEKKTEKQPPKEHKRYNLKKLTYEERKAKLIERLQSLNAAAGADDDDDE* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00790 247 SUPERFAMILY Translational machinery components 45 199 - -
Pte14g00790 247 PRINTS Ribosomal protein L5 signature 32 52 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pte14g00790 247 PRINTS Ribosomal protein L5 signature 92 111 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pte14g00790 247 PRINTS Ribosomal protein L5 signature 154 174 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pte14g00790 247 PRINTS Ribosomal protein L5 signature 112 131 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pte14g00790 247 MobiDBLite consensus disorder prediction 198 217 - -
Pte14g00790 247 Pfam Ribosomal L18 C-terminal region 183 236 IPR025607 -
Pte14g00790 247 Coils Coil 218 238 - -
Pte14g00790 247 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 44 123 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pte14g00790 247 Gene3D - 42 239 - -
Pte14g00790 247 PANTHER RIBOSOMAL PROTEIN L5-RELATED 45 238 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00790 Pte-Chr14 29446392 29449173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00790 31 240 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 76.667 2.44e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00790 K02932 - pop:18108544 342.813