Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00773 ATGGGACGGCGAGGGAGATGGCGACACGAGCATGCAAGAATTGCTGCCTACAAGATTTGCTGGCTTGGTGGCTGTCTCAGTTCTGATATTGCTGCAGCCATTGATGGAGCTGTGGAAGATGGCGTTAATGTGTTAGAAGAAGCACAAGTCCAAGTAGAGGCTGCACCTGCAGCAGTGGTAGAAGATCTGGACATTGAGAAAGCTTTGGAGCTTGTGCTAAGGAAGTCAAATGCATATGGTGGACTAGCACAGGGACTCCACGAGGGTGCCAAGGCCATTGAAAAGCGTACTACTTTTCTATGTGTTCTTGCAGAGGACTGTGATGAGCAAAATTATGTTAAGTTGGTGAAGGCACTTTGTGTTGAGCACAATATTGATCTGTTTACCGTCCCAAGTGCGAAGACCCTTGGCGAGGGGGCTGGTGTAAGTAAATTGACAGTTGAGCAGGGCCAGGAGCAAAACCCATCAACTTATCAAGCTTGGAAAGATCCTGACATGGTTGGCATGAATAATGACTTGTATTGCCATGTTTCAGATTAA 540 0.4704 MGRRGRWRHEHARIAAYKICWLGGCLSSDIAAAIDGAVEDGVNVLEEAQVQVEAAPAAVVEDLDIEKALELVLRKSNAYGGLAQGLHEGAKAIEKRTTFLCVLAEDCDEQNYVKLVKALCVEHNIDLFTVPSAKTLGEGAGVSKLTVEQGQEQNPSTYQAWKDPDMVGMNNDLYCHVSD* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00773 179 Gene3D - 64 160 IPR029064 -
Pte14g00773 179 PANTHER 40S RIBOSOMAL PROTEIN S12 52 149 - -
Pte14g00773 179 PRINTS Ribosomal protein S12E family signature 86 102 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte14g00773 179 PRINTS Ribosomal protein S12E family signature 72 85 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte14g00773 179 PRINTS Ribosomal protein S12E family signature 127 148 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte14g00773 179 ProSitePatterns Ribosomal protein S12e signature. 68 86 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte14g00773 179 SUPERFAMILY L30e-like 63 146 IPR029064 -
Pte14g00773 179 Gene3D Peptidase S8/S53 domain 11 45 IPR036852 GO:0004252|GO:0006508
Pte14g00773 179 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 68 148 IPR004038 -
Pte14g00773 179 SUPERFAMILY Subtilisin-like 11 45 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00773 Pte-Chr14 29242944 29244304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00773 59 148 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 64.444 8.63e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00773 K02951 - gmx:100500093 129.798