Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00762 ATGGTGAAGCATAACAATGTTATCCCAAACGGACATTTCCGTAAGCATTGGCAAAACTATGTGAAAACTTGGTTCAATCAACCAGCCAGGAAGACAAGGAGACGGTTAGCTCGCCAGAAGAAAGCTGTTCATACTTTCCCAAGGCCTGCTGATTGTCTCAGACCGGTTGTTCATGGCCAAACATTGAAGTACAACATGAAAGTTAGAGCTGGGAGAGGATTTTCTCTGGAAGAACTGAAGGCTGCTGGCATTCCCAAAAAATTAGCACCAACAATTGGCATTTCTGTTGATCATCGGCGCAGAAACAGTTCTTTGGAAGGTCTTCAAGCTAATGTCCAGAGACTAAAGACATACAAGGCTAAATTAGTGGTGTTTCCAAGGCGTCCAAAGAAGTTCAAGGCTGGTGATTCCTCTCCTGAGGAACTTGCCAATGCCACCCAAGTGCAGGGTGACTACATGCCTATTGCTAGAGAGAAGCCAGCTGTGGAGCTTGTGAAAGTTACTAACGAGATGAAGTCATTTAAGGCCTATGCCAAGCTCCGTCTTGAGCGTACAAACCAGCGTCATGTTGGTGCCAGGTTGAAGAAGGCTGCTGAAGCTGAAAAGGAAGACAAGAAGTAA 621 0.4557 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVHTFPRPADCLRPVVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNSSLEGLQANVQRLKTYKAKLVVFPRRPKKFKAGDSSPEELANATQVQGDYMPIAREKPAVELVKVTNEMKSFKAYAKLRLERTNQRHVGARLKKAAEAEKEDKK* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00762 206 MobiDBLite consensus disorder prediction 186 206 - -
Pte14g00762 206 PANTHER 60S RIBOSOMAL PROTEIN L13 1 206 IPR001380 GO:0003735|GO:0005840|GO:0006412
Pte14g00762 206 ProSitePatterns Ribosomal protein L13e signature. 69 83 IPR018256 GO:0003735|GO:0005840|GO:0006412
Pte14g00762 206 Pfam Ribosomal protein L13e 7 184 IPR001380 GO:0003735|GO:0005840|GO:0006412
Pte14g00762 206 Hamap 50S ribosomal protein L13e [rpl13e]. 45 127 IPR001380 GO:0003735|GO:0005840|GO:0006412
Pte14g00762 206 Gene3D - 166 206 - -
Pte14g00762 206 FunFam 60S ribosomal protein L13 165 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00762 Pte-Chr14 29149200 29151352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00762 2 191 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 82.723 2.10e-119 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00762 K02873 - csav:115711328 350.903