Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00757 ATGGCTGTGAATTTGAGTGAAGGAGCGATAGAAACGATGTCGAGGCAAGGAGGTGGTTGCGACAATTTACAACCTTTGCTTCAAGTGATTGACTTGAGGTTGGTTCAGTCACAGCAGACTAACATCACGGAGAGGTACAGGGTTGTGCTTTCTGATGGACAACACTACCAGCAAGGGATGCTTGCTACCCAGAAGAACGAGTTGGTCAAATCGGGAGAATTGACTAAAGGCTCTATTGTTCAGTTGACTCAGTTCATCTGCAATGTGGTTCAGAGCCGCACAATTATCATTGTCATCGACCTGAACGTCATCCTTTCAGAATGTCCTCAAATTGGAGAACCCGTACCAGCTCTAAAACTTAACTCTACGCAAACTTCTACAGTTAAACCTGGAACTGTGGCTGAGAACCCCCAATCTGTCTCCGGCAGTTCGCCTGTGAGTAGTGTTCTCACAAAGCCTAATACAGACAGATCATCTGTGGATCATTCTGTCACAAATCAGCTATGCGTTAATGCTAATTCAGGTGATGCTGAAATGGGAAGATATGGTCCAAATGCACCACCTTCTTACTCTAAAACTGGGATTAATATTTCTAAAGTGGAATCTTCAACTAGATCATATGATCACCGAAACACGGGTTACCAGAATCCCAATTCAGAAGTTCAAAGACAACCTTCAAATCCTTACGTTCGCCCACTTCAGCCTGCTTATCAACAGCCTGCTCCAATCTACACCAACAGAGGGCCAATAGGTCACAGCTCCGCAAATTGCCCAGCCATGATCAATGGGTCAGGGCTTTCTGCTGGAGGAGGCTATACCAGTAGGGTATCATCAGGACCTGGTGTTAGTGCTTCATCTGGTCAATGTTTTAAATGCCATCAATCTGGGCACTGGGCTAAGGACTGCCCAGGTATCAGCACAGTTCCTCCGGCTTATGGAAGTGGGAGCTACGGAGGTGGTCAAAGACAACAAGTCGGTGGGTTTTGA 987 0.462 MAVNLSEGAIETMSRQGGGCDNLQPLLQVIDLRLVQSQQTNITERYRVVLSDGQHYQQGMLATQKNELVKSGELTKGSIVQLTQFICNVVQSRTIIIVIDLNVILSECPQIGEPVPALKLNSTQTSTVKPGTVAENPQSVSGSSPVSSVLTKPNTDRSSVDHSVTNQLCVNANSGDAEMGRYGPNAPPSYSKTGINISKVESSTRSYDHRNTGYQNPNSEVQRQPSNPYVRPLQPAYQQPAPIYTNRGPIGHSSANCPAMINGSGLSAGGGYTSRVSSGPGVSASSGQCFKCHQSGHWAKDCPGISTVPPAYGSGSYGGGQRQQVGGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00757 328 FunFam Replication protein A subunit 4 118 - -
Pte14g00757 328 Pfam Replication factor-A protein 1, N-terminal domain 5 105 IPR007199 GO:0003677|GO:0005634|GO:0006260
Pte14g00757 328 SUPERFAMILY Nucleic acid-binding proteins 1 112 IPR012340 -
Pte14g00757 328 SUPERFAMILY Retrovirus zinc finger-like domains 272 307 IPR036875 GO:0003676|GO:0008270
Pte14g00757 328 Gene3D - 238 305 - -
Pte14g00757 328 MobiDBLite consensus disorder prediction 127 162 - -
Pte14g00757 328 Gene3D - 3 117 IPR012340 -
Pte14g00757 328 PANTHER RPA-RELATED PROTEIN RADX 24 101 IPR040893 GO:0003697
Pte14g00757 328 Pfam Zinc knuckle 288 303 IPR001878 GO:0003676|GO:0008270
Pte14g00757 328 CDD RPA1N 8 104 IPR007199 GO:0003677|GO:0005634|GO:0006260
Pte14g00757 328 ProSiteProfiles Zinc finger CCHC-type profile. 289 303 IPR001878 GO:0003676|GO:0008270
Pte14g00757 328 MobiDBLite consensus disorder prediction 201 226 - -
Pte14g00757 328 SMART c2hcfinal6 288 304 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00757 Pte-Chr14 29104747 29107564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00757 1 262 Core DNA Replication Machinery Family AT5G45400 32.468 2.33e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00757 K07466 - qsa:O6P43_033421 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00757 14 29104747 29107564 Pte14g00757 14 29104747 29107564 RCT