Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00750 ATGGGAATTCATAAGGACACAACACAAAATCAGGGAATAATTTGTATGGAGGATGCCAACATGATCAGAAGTGAATTAAGCAAGCTCAGAGGTTGTGTGGTTTGTAAACAGAGTTTGATTCAAGACTTCAAGGTACTGCGTATTGGAGAAATGGGTGGCTGTGTCAGTTGCTGTTACTTGCAAGTCAAATGTTTCTGTCTACGAAGGCAAAGACATGAGTTTTTGCCTGTTGCTTATTGGAGAATGGAAAAAAAAGGGAGACCTAAACATTTATTAATTGTAGACACCATAGGAAGCTGTTATCAGAATCCTTCATTTCAACTTTGCAAACCAATATGCTACATCACAGCATACTGTGAGCCAGCATGTTTGACTTACTGCCCCACCAACTGTTCCTGCACAAACAAATGCTTAAGCGTTATGTTCTATGACAATCCAGCCCCAAGTCCTCCCATATACCAAGAACATAGCCAGAAATCCAACAGAGCTCCAAAACTTTTGGTCACATCCCTTGTTGCTCTTTGTGCAGTTTTGTTAGTTGTTTGCTTCTGTGCTATGTATTACAGGTTCTATGGCAACAGGAGAACACACCAGCAATCAAATCAAACAATTGACGATTATCTTGATGAAGATCATCAAGGTCCTATTTTGGATCACCCCATCTGGTATATTCGTACCACTGGTCTGCAACCATCGATTATAAGTTCAATTACTGTGTTGAAATATAAGAAAGGAGAGGGTATTGTGGATGGAACGGTTTGTTCTGTGTGTTTGACTGAATTTCAAGAGGATGAGACTGTTAGACATTTGCCTAAGTGTAGTCATGCCTTTCATGTTTCCTGTATTGACACTTGGCTTAGGTCACATACCAATTGCCCTTTGTGCCGAGCGCCTATTGTCACCAGTAGTACTATAAGAACAACTACACCATTTCATGTTTGGGACTTTGAGACTTGA 957 0.4033 MGIHKDTTQNQGIICMEDANMIRSELSKLRGCVVCKQSLIQDFKVLRIGEMGGCVSCCYLQVKCFCLRRQRHEFLPVAYWRMEKKGRPKHLLIVDTIGSCYQNPSFQLCKPICYITAYCEPACLTYCPTNCSCTNKCLSVMFYDNPAPSPPIYQEHSQKSNRAPKLLVTSLVALCAVLLVVCFCAMYYRFYGNRRTHQQSNQTIDDYLDEDHQGPILDHPIWYIRTTGLQPSIISSITVLKYKKGEGIVDGTVCSVCLTEFQEDETVRHLPKCSHAFHVSCIDTWLRSHTNCPLCRAPIVTSSTIRTTTPFHVWDFET* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00750 318 ProSiteProfiles Zinc finger RING-type profile. 254 296 IPR001841 -
Pte14g00750 318 SMART ring_2 254 295 IPR001841 -
Pte14g00750 318 SUPERFAMILY RING/U-box 248 302 - -
Pte14g00750 318 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 157 301 IPR044675 -
Pte14g00750 318 SMART FANCL_C_2 250 304 - -
Pte14g00750 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 304 IPR013083 -
Pte14g00750 318 Pfam Ring finger domain 253 296 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00750 Pte-Chr14 28916010 28923714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00750 87 313 C3H Transcription Factor Family AT1G72220 38.983 1.06e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00750 - - csav:115725493 219.935