Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00748 CTTGACCGGAAGAAGGTGAAGAATATAAAGCACAATCGTAACATAAGCCTGGACGATGTTATCGAGATTGCTAAGGTAATGAGTCCTAGGTCAATGGTTAAGGACCTCACAGGAACATTGAAGGAGATTTTGGGTACCTACATATTTGTTAGTTGCACAATAGATGGGAAGGATAGAAGGATTTACAGCAAGGAGATTGCAGTCGGTGATGTTGAAGTCCCTCAAAAATGA 231 0.4113 LDRKKVKNIKHNRNISLDDVIEIAKVMSPRSMVKDLTGTLKEILGTYIFVSCTIDGKDRRIYSKEIAVGDVEVPQK* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00748 76 Pfam Ribosomal protein L11, RNA binding domain 13 46 IPR020783 GO:0003735|GO:0005840|GO:0006412
Pte14g00748 76 PANTHER 60S RIBOSOMAL PROTEIN L12 3 55 IPR000911 GO:0003735|GO:0005840|GO:0006412
Pte14g00748 76 Gene3D - 1 74 IPR036769 -
Pte14g00748 76 SUPERFAMILY Ribosomal protein L11, C-terminal domain 5 57 IPR036769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00748 Pte-Chr14 28868186 28868416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00748 2 77 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 64.474 8.41e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00748 K02870 - ini:109193063 115.931