Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00730 ATGGGTCGAAAGCACAGACGCGAATCTCAAATTCCCTTCGAACCAGTTGCAGAAGAAGCCGCCGATATCAAATCTGAGAAGAAGAAGAAGAATGATAAGAAGAAAAATAACAATGAGCTGAACGGAGCTAACCAGAAGAGAAAGCTTGAAGAAGCAAGCGAGTCTGAGGAAGCCGCTGAAACCCAGAAGAAGAAAAGCAAGAAGAAAAATAAGAAATTGGAAGAGAACGGGGAGAGTAAAAAGCTTGAAGGAAAATATGAGCCTAGAGAAAATGGCGGCGGTGATGGAGAAGACGATGAAGTTAGAGATGGGTCAGTGGTGGTTTCTGGAAAGGATGTCAGCGAATCGAAATATGAGGCTTTGAAGTCTTTTGCTGCATCTGGGCTTCCGGAGAACGTTCTGGAGTGTTGTAAGAATTTTAACAAACCATCGCCCATTCAGTCGCAGGCGTGGCCGTTTTTGTTAAACGGTCGTGATTTTATTGGGATCGCGGCGACTGGGTCTGGAAAGACACTGGCTTTTGGCATTCCGGCCATGATGCATGTGTTGGGCAAAAGGAAAGTTAGAGGTTCAAAAGGAAGGTATCCCCTTTGCCTTGTACTTTCTCCTACAAGGGAGCTAGCTCAGCAGATATTTGATGTTATGTGCGATGCTGGGAAATCTTGCGGTGTTGAATCCATTTGTTTATATGGTGGAACCTCAAAAGGGCCACAAATATCTGCTCTGAAGTCTGGTGTTGATATTGTTATTGGAACTCCAGGGCGCATTGTAGATTTGGTAGAAACAGGTGTTTTGCACCTAAGTGAGGTATCCTATGCGGTCCTTGATGAAGCTGATCGAATGCTTGATATGGGATTTGAACAAGCAGTACGATCAATACTAGGCCAGACATGTTCTGCTCGTCAGATGGTGATGTTCAGTGCCACATGGCCTCTATCTGTTCATCAATTGGCTCAAGAATTTATGGACCCAAACCCTGTCAAGGTTGTTGTGGGGTCAGAAGATTTAGCTGCAAACCATGATGTCATGCAGATAGTTGAGGTCTTAGATGAACGATCGCGGGACAAGAGGTTGGTTGCTTTGTTGGAAAAATATCACCAAACACAGAGGAATAGAGTCTTGGTGTTTGTTTTGTACAAATGGGAAACGACAAGAGTGGAAAAAATGCTCCAAGAAGGGGGATGGAAGGTCGTTTCTATTCATGGTGATAAAGCACAGCAGCAACGGACCAAGGCATTATCTTTATTCAAGGAAGGAAACTGCCCTCTGATGATTGCAACTGATGTGGCTGCCCGTGGATTAGATATTCCAGATGTTGAAGTAGTGATCAATTATAGCTTTCCTCTTACTACTGAAGATTATGTGCACAGAATTGGACGGACTGGACGTGCTGGTAAAAAAGGCGTTGCTCACACTTTCTTCACACAGCAAAATAAGGGACTTGCAGGTGAGCTGGTTAATGTTCTCAGAGAAGCAGGACAGATTGTTCCTGAGGCACTTTTAAAGTTTGGGACACACGTCAAGAAAAAGGAGTCCAAGCTGTATGGCGCCCACTTCAAGGAGATTACAGTCAATGCACCAAAATCACAGAAGATAAAGTTTGATGACTCCGACGAAGATTAA 1623 0.4418 MGRKHRRESQIPFEPVAEEAADIKSEKKKKNDKKKNNNELNGANQKRKLEEASESEEAAETQKKKSKKKNKKLEENGESKKLEGKYEPRENGGGDGEDDEVRDGSVVVSGKDVSESKYEALKSFAASGLPENVLECCKNFNKPSPIQSQAWPFLLNGRDFIGIAATGSGKTLAFGIPAMMHVLGKRKVRGSKGRYPLCLVLSPTRELAQQIFDVMCDAGKSCGVESICLYGGTSKGPQISALKSGVDIVIGTPGRIVDLVETGVLHLSEVSYAVLDEADRMLDMGFEQAVRSILGQTCSARQMVMFSATWPLSVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDERSRDKRLVALLEKYHQTQRNRVLVFVLYKWETTRVEKMLQEGGWKVVSIHGDKAQQQRTKALSLFKEGNCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQQNKGLAGELVNVLREAGQIVPEALLKFGTHVKKKESKLYGAHFKEITVNAPKSQKIKFDDSDED* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00730 540 SMART ultradead3 139 345 IPR014001 -
Pte14g00730 540 MobiDBLite consensus disorder prediction 71 103 - -
Pte14g00730 540 Pfam Helicase conserved C-terminal domain 356 465 IPR001650 -
Pte14g00730 540 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 60 500 - -
Pte14g00730 540 Gene3D - 332 507 IPR027417 -
Pte14g00730 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 478 IPR027417 -
Pte14g00730 540 MobiDBLite consensus disorder prediction 1 64 - -
Pte14g00730 540 Gene3D - 96 331 IPR027417 -
Pte14g00730 540 MobiDBLite consensus disorder prediction 1 103 - -
Pte14g00730 540 CDD DEADc 138 329 - -
Pte14g00730 540 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 274 282 IPR000629 -
Pte14g00730 540 CDD SF2_C_DEAD 342 474 - -
Pte14g00730 540 Coils Coil 23 43 - -
Pte14g00730 540 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 151 328 IPR014001 -
Pte14g00730 540 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 122 148 IPR014014 GO:0003724
Pte14g00730 540 Coils Coil 49 83 - -
Pte14g00730 540 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 341 504 IPR001650 -
Pte14g00730 540 Pfam DEAD/DEAH box helicase 145 314 IPR011545 GO:0003676|GO:0005524
Pte14g00730 540 SMART helicmild6 384 465 IPR001650 -
Pte14g00730 540 FunFam ATP-dependent RNA helicase RhlB 331 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00730 Pte-Chr14 28373103 28378236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00730 119 473 Eukaryotic Initiation Factors Gene Family AT3G19760 34.174 2.26e-55 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00730 K14811 - gmx:100305353 756.518