Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00708 ATGGTGGAAGGAAGGGGTTTTACCTCCAGGGGAGCAAGAAATGGGTTAGAATTCTTAAGGCACAAAAGGCTTGAACGAATGAGATCAGGAAATGCCACCGACACAAAAAATGTATCCAACACGATGGCCAGAAGTGGGGGAGATGCTTTAAGAGCTTCTTCATCATGTGGTGTGAGATTGCATGGTAATGTGGATACCTTCTATAAGCAGAAGGTGGATAAGTTTAACACAACTGATCTCAATTGGACTGAGAAAATTCCAGAATGCCCTGTGTATTCTCCAACAAAGGAGGAATTTGAGGATCCTTTGGTTTATTTGCAGAAGATAGCTCCAGAAGCTTCCAAATATGGTATCTGCAAGATTATTTCACCGTTGACTGCATCTGTTCCTGCGGGGGTTGTGTTGATGAAGGAGCAAGCGGGATTCAAGTTCACTACCAGAGTGCAGCCACTTCGTCTTGCAGAATGGGATTCTGATGACAGAGTCACATTTTTCAGGAGTGGCGTAAACTATACATTTCATGATTATGAGAAAATGGCGAACAAGATTTTTGCACGTAGATACTGCAGTGCAGGAAGTCTTCCTGACTCATATATGGAAAAAGAATTTTGGCAAGAAATTGCTTGTGGGAAGACAGAAACTGTGGAATATGCATGTGATGTTGATGGAAGTGCCTTTTCATCTTCTCCCAGTGATCAGCTTGGAAATAGCAATTGGAACTTGAAGAATCTTTCACGGTTGCCAAAGTCTACTCTGCGTCTCCTTGAGAGGGTGATCCCGGGAGTAACTGAGCCCATGCTATACATTGGGATGCTATTTAGTATGTTTGCATGGCACGTAGAGGATCATTGTTTGTACAGCATAAATTATCATCATTGTGGGGCATCAAAAACTTGGTATGGAATCCCTGGTCATGCAGCTTTAGAATTTGAAAGCGTGGTTAGAGAACATGTATATACCAGTGACATCCTATCAAGTGAAGGAGAAGATGGAGCTTTTGATATACTAATGGGGAAGACAACCCTTTTCCCTCCAAAAGTTCTTTTGGAGCATCAAGTTCCTGTCTACAAGGCTGTCCAAAAGCCTGGGGAATTTATAATTACCTTTCCTAGAGCTTATCATGCTGGGTTTAGCCATGGCTTTAATTGTGGTGAGGCTGTTAACTTTGCAATTGGAGATTGGTTTCATCTTGGTGCCATTGCTAGCCAACGCTATGCACTCCTAAATAGAGTACCTTTGCTTCCTCATGAAGAGCTTCTCTGTAAGGAAGCAATGCTTCTTCAGAGCAGAGTAGAGCATCAAAATGCAGACTTGTCATCATCTGACTTGTTCTCTCAACAAAGCATAAAAGTTGCTTTCATTAATCTTATGCGCTTCCAGCATTGTGCTCGGTGGTCCCTGATGAATTCAAGAGTTTGCTCAAGTATTACTTCAAATCCCCATGGGACCATTGTCTGCAGTCTCTGCAAACGTGATTGTTACGTAGCTTATGTTAACTGCAGCTGTCACATGCACCCAGCTTGTCTTCGCCATGATATCAAGTCACTGAACTTATCATGTGGAAACAAACATACCCTCTGTTTAAGGGAGGACATTTCAGAACTGGAAGGTGCAGTTAAGAAATTTGAACGTGAATTTGGGACGTCAAATGAGATAATTAGGAAAGCCAGCAGCGATGAAAATATGTATGTATATCCATTATCAAACATATTTGAAAAAGCTGAAGAGGCTGGCTATTCTCCTTATTGTGAAATTAAAGTAGAGACAGATCTGGAGCTGAGCACTGTGAATCTTTTCCAAAAGCAAGAACATATTTCAAATATTCAGTCCACTTTGAGGCATTGCTCTGGAGATCTCAGAACTGACGCACGTCATGATTCTCTAGTTTCGGCCTCATTGGCCCTCTGTTCTGCTTCATCAACAGTATTTTCTTTTCAAGAACCTCACGAGAGATCGTCTGCTCTGGAGGAAAATGATTCTAGACAGGCCAACAATTGTACAGGACCTACAGGTGTGGGTAATTGTCCTGGATTCTCCCATCAAAGTTTACGTGAATCTTCTTTGTCCTCCTCTCCATGTCAGGAAAGAGTGACTAAACACAATGTTTATAAATCAGAGATTATACCAACTGTGGACAACGACAGTGATGAGTCTGATACCGAAGCATTTAGGGTGAAACGACGATCATCTGTGAAGATGGACAGAAGAAATGTGAGTGGCGCCATTGATTCAAAACATCAGTATGAACATCAGGTAGGGTTTTACTGA 2268 0.4193 MVEGRGFTSRGARNGLEFLRHKRLERMRSGNATDTKNVSNTMARSGGDALRASSSCGVRLHGNVDTFYKQKVDKFNTTDLNWTEKIPECPVYSPTKEEFEDPLVYLQKIAPEASKYGICKIISPLTASVPAGVVLMKEQAGFKFTTRVQPLRLAEWDSDDRVTFFRSGVNYTFHDYEKMANKIFARRYCSAGSLPDSYMEKEFWQEIACGKTETVEYACDVDGSAFSSSPSDQLGNSNWNLKNLSRLPKSTLRLLERVIPGVTEPMLYIGMLFSMFAWHVEDHCLYSINYHHCGASKTWYGIPGHAALEFESVVREHVYTSDILSSEGEDGAFDILMGKTTLFPPKVLLEHQVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFAIGDWFHLGAIASQRYALLNRVPLLPHEELLCKEAMLLQSRVEHQNADLSSSDLFSQQSIKVAFINLMRFQHCARWSLMNSRVCSSITSNPHGTIVCSLCKRDCYVAYVNCSCHMHPACLRHDIKSLNLSCGNKHTLCLREDISELEGAVKKFEREFGTSNEIIRKASSDENMYVYPLSNIFEKAEEAGYSPYCEIKVETDLELSTVNLFQKQEHISNIQSTLRHCSGDLRTDARHDSLVSASLALCSASSTVFSFQEPHERSSALEENDSRQANNCTGPTGVGNCPGFSHQSLRESSLSSSPCQERVTKHNVYKSEIIPTVDNDSDESDTEAFRVKRRSSVKMDRRNVSGAIDSKHQYEHQVGFY* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00708 755 PANTHER LYSINE-SPECIFIC DEMETHYLASE 82 701 - -
Pte14g00708 755 Pfam C5HC2 zinc finger 486 536 IPR004198 -
Pte14g00708 755 MobiDBLite consensus disorder prediction 648 669 - -
Pte14g00708 755 Gene3D Cupin 82 411 - -
Pte14g00708 755 SUPERFAMILY Clavaminate synthase-like 168 422 - -
Pte14g00708 755 SMART cupin_9 236 406 IPR003347 -
Pte14g00708 755 ProSiteProfiles JmjN domain profile. 89 130 IPR003349 -
Pte14g00708 755 SMART JmjN_1 88 129 IPR003349 -
Pte14g00708 755 FunFam Lysine-specific demethylase isoform A 84 433 - -
Pte14g00708 755 Pfam JmjC domain, hydroxylase 266 389 IPR003347 -
Pte14g00708 755 Pfam jmjN domain 90 122 IPR003349 -
Pte14g00708 755 ProSiteProfiles JmjC domain profile. 236 406 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00708 Pte-Chr14 28108754 28115521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00708 86 559 JUMONJI Transcription Factor Family AT1G08620 32.264 1.05e-62 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pte14g00708 JmjC 3.1e-40 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00708 - - qsa:O6P43_025118 1044.26