Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00700 ATGGATAACAGCGGTGGAAGCGGTGACGGTGGTGATGCGCCGCCTGCGACACCAGCTCCGGCACCTATTCCAAACGCAAATGCGCCGCCGCCTTTTTTAAGCAAGACTTACGATATGGTGGATGACCCATCTACTAATTCGGTCGTCTCTTGGAGTGCAACCAATAATAGCTTTGTGGTCTGGAACCCACCCGAGTTTGCCAGAGACTTATTGCCAAAGTACTTCAAGCACAATAACTTCTCTAGCTTTGTTAGGCAGTTGAATACATACGGTTTCAGGAAGGTTGATCCAGACCGCTGGGAATTTGCAAATGAAGGCTTTTTGAAGGGTCAAAAGCACTTGCTTAAGACTATAATACGGCGAAAACCTGCACATGGACATGGTCAACAACAGTCGCAACAATCACATGGGCAGAGTGCATGTGTGGAAGTTGGGAAATTTGGACTGGAAGAAGAGGTTGAGAGGCTTAAAAGGGACAAAAATGTTTTGATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAACAGGCAACTGACAACCAACTGCAAACCATGGTACAACGCCTTCAAGGAATGGAGCAAAGACAGCAACAAATGATGTCATTTCTGGCAAAAGCTGTTCAGAGTCCTGGCTTCTTTGCTCAGTTTGTACAGCAGAAAAATGAAAGCAATAGGCGAATAACGGATGCTAACAAAAAACGTAGGCTCAAGCAGGAAGGTATTGCAGAGAGTGGACATTCTACTGGTACCGATGGACAAATTGTTAAGTATCAGCCTTCGGTGAATGAGGCAGCAAAAGCGATGCTAAGGCAGATCATGAAATCGGATACCCCGCAGATGGAATCTTTAGACAACACTCCTGATAATTATTTGATTGGTGATGGGTTATCGCCATCCAATGCATCGGATGATGGCAGCACCTTGAGTCGAGCTTCAGGAGTGTCACTTCAAGAAGTTCCACCTACTCAAGCTACGGTCCAATCTTCTCACCCTCTAGCTGCATCAGGAGCTAGCCACATAGGAGCCTCATCTAAAATGCAATCTTCTCCTAAAAAACTATCTAATCCTCAATTTGCAGATATGGCCATGCTTGTGGAAACCTCCGAATCACATTCTGTACCAGTCTCCCAGGCAGATATTATTAGTCCCGGTTTATCCTCATTAGCAGAGATGGTTCCAGGAAATATGATTGACATTGATGATGGAAATTACATGGGGCCTGACACAGGGAATGAAGGGTTCATTGGCTCTGCTTCATTAGGTATCAGTGGATCAATACCCATCGATTTCGACAATATCTCTCCTCATGAAGTTCCTGACTTCGATGACATACTAGATTCGAACTTTGACTTGGAAGACTTACTTGTAGAAAGTCCTGGGCTAGAAGAGATTCAACTGTCACCATCTGCTGAAGTACTCGAAGGGAATGAGATGCAAATAATGGAAAATGGATGGAACAAAACTCAACATTTGGACCAACTTACAGAACAGATGGGACATCTTTCTTCAGATTCCAAAGGTGTTTGA 1524 0.4475 MDNSGGSGDGGDAPPATPAPAPIPNANAPPPFLSKTYDMVDDPSTNSVVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLKGQKHLLKTIIRRKPAHGHGQQQSQQSHGQSACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQKNESNRRITDANKKRRLKQEGIAESGHSTGTDGQIVKYQPSVNEAAKAMLRQIMKSDTPQMESLDNTPDNYLIGDGLSPSNASDDGSTLSRASGVSLQEVPPTQATVQSSHPLAASGASHIGASSKMQSSPKKLSNPQFADMAMLVETSESHSVPVSQADIISPGLSSLAEMVPGNMIDIDDGNYMGPDTGNEGFIGSASLGISGSIPIDFDNISPHEVPDFDDILDSNFDLEDLLVESPGLEEIQLSPSAEVLEGNEMQIMENGWNKTQHLDQLTEQMGHLSSDSKGV* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00700 507 SUPERFAMILY "Winged helix" DNA-binding domain 27 121 IPR036390 -
Pte14g00700 507 MobiDBLite consensus disorder prediction 220 252 - -
Pte14g00700 507 MobiDBLite consensus disorder prediction 1 39 - -
Pte14g00700 507 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 25 327 IPR027725 -
Pte14g00700 507 SMART hsfneu3 28 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00700 507 MobiDBLite consensus disorder prediction 15 29 - -
Pte14g00700 507 FunFam Heat shock transcription factor 1 25 122 - -
Pte14g00700 507 MobiDBLite consensus disorder prediction 224 240 - -
Pte14g00700 507 MobiDBLite consensus disorder prediction 277 353 - -
Pte14g00700 507 Coils Coil 146 173 - -
Pte14g00700 507 Gene3D - 25 122 IPR036388 -
Pte14g00700 507 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00700 507 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00700 507 PRINTS Heat shock factor (HSF) domain signature 32 55 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00700 507 ProSitePatterns HSF-type DNA-binding domain signature. 71 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00700 507 Pfam HSF-type DNA-binding 32 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00700 Pte-Chr14 28058446 28062564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00700 4 504 HSF AT1G32330 52.115 3.93e-166 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte14g00700 HSF_DNA-bind 2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00700 K09419 - tcc:18606792 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00700 14 28058446 28062564 Pte14g00700 14 28058446 28062564 RCT