Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00698 ATGGGAAGGCCCCCATGTTGTGATGAGCGCGATTTGAAGAAAGGACCATGGACACCTGATGAAGATCAGAAACTTGTGGATTACATTAAGGAACATGGACATGGAAGTTGGAGAACACTTGCAAAGCTAGCTGGTCTGAATAGGTGTGGGAAAAGTTGCAGGTTAAGGTGGGCAAATTATCTGAAGCCTGATATCAAAAGAGGGAAATTCACAGAAGATGAAGAAAGAATGATGATCAACCTTCATGCAGTTCTTGGAAACAAGTGGTCAAAGATTGCAAGCCATCTTCCAGGGCGTACTGATAATGAGATCAAGAACTATTGGAATACCAATCTTAGGAAAAAGCTTCTACAAATGGGAATTGATCCAAGTACTCATAAGCCAAGAACTGACTTCAACCACCTCATGAATCTATCACAATTGATTGGGTTGTCAAACCCAAGCAATCCAATGAATAACAATTGGGGTAACACTCTTGCAATGCAAATTAAGGATATCACTCAAGTAGCCAAACTCCAGCTCTTGCAAAATCTTCTGCAAACTATGAACCCCAATCCGCTTCTTAACTTTGGAAACCCTAATCTTAGTCTCTTAACAAACCACAGCCTCAACAATCCATTTCAAGGGCTCGTTAATAGGACAAACACTGACCTATTGATAGGTCAGCTTCAGCAGTATGCAGACCATTGTCTTTCCAATCCGAAACAGTGTTCACCTCAGGCCAACACCAAATCAGCGCCAGGCACAGAAGATGGAACGAATGGTCTAGGGTTTTTTGCTGTCCGAAATAGCTCGAGTTCCTCTCAAGGTGATCTAGCAGTTAACAACAGCTTGAGTACTGCACAACAAGATCAAGCAGGATTTGTGCTGCCTCCTTTGGTGTCAGCTTCCTCAAGTACTTGCAGCCATTCCAACCAGAAAGAAAGTACTAGTAACCCAACTCAGGCCTCCACACAATCACCTTCCTCCTCCTCTGTATTTGAAGCTTGGGAGAAACTAATGGACGATGACACAAGCGGATCATACTGGAAAGAAATTCTTGAGTAA 1047 0.4288 MGRPPCCDERDLKKGPWTPDEDQKLVDYIKEHGHGSWRTLAKLAGLNRCGKSCRLRWANYLKPDIKRGKFTEDEERMMINLHAVLGNKWSKIASHLPGRTDNEIKNYWNTNLRKKLLQMGIDPSTHKPRTDFNHLMNLSQLIGLSNPSNPMNNNWGNTLAMQIKDITQVAKLQLLQNLLQTMNPNPLLNFGNPNLSLLTNHSLNNPFQGLVNRTNTDLLIGQLQQYADHCLSNPKQCSPQANTKSAPGTEDGTNGLGFFAVRNSSSSSQGDLAVNNSLSTAQQDQAGFVLPPLVSASSSTCSHSNQKESTSNPTQASTQSPSSSSVFEAWEKLMDDDTSGSYWKEILE* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00698 348 CDD SANT 69 112 IPR001005 -
Pte14g00698 348 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte14g00698 348 FunFam Transcription factor MYB39 69 130 - -
Pte14g00698 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte14g00698 348 CDD SANT 16 61 IPR001005 -
Pte14g00698 348 FunFam MYB-related transcription factor 13 66 - -
Pte14g00698 348 MobiDBLite consensus disorder prediction 299 327 - -
Pte14g00698 348 Gene3D - 69 116 - -
Pte14g00698 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 311 - -
Pte14g00698 348 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte14g00698 348 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pte14g00698 348 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte14g00698 348 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pte14g00698 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte14g00698 348 SMART sant 13 63 IPR001005 -
Pte14g00698 348 SMART sant 66 114 IPR001005 -
Pte14g00698 348 Gene3D - 11 67 - -
Pte14g00698 348 MobiDBLite consensus disorder prediction 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00698 Pte-Chr14 28014218 28015367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00698 1 349 MYB Transcription Factor Family AT5G16770 44.847 6.55e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte14g00698 Myb_DNA-binding 2.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00698 K09422 - qsu:112034724 346.665