Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00691 ATGGCATCGGTTGATGACCATAAAACTTGGTTTCCCTATATGAATGGGAAAGGCTGTTCCGAGGGCTTCTGCACTTTCTACTGTCCACAATGGTGTTATATCTACCCCCCTCCACCCCCATTTGAATTTCCTGAAGATAATTCTAACCGACGTTTCTCTCCTCTTGTAATTGTCATCATTGGGGTTCTTGCCAGTGCCTTTCTACTCGTGAGTTACTATACTTTGATATCAAAGTACTGCGGCAACATGGATTCCTCTCAGACGCAAAATCATGATGATCAAGACGAGGAATTAGAAGAAAATCACAACCCCAGTTTGCATGAGCCATGGCAAGCTGTAACGACAGGCTTAGATGAAGCTCTGATCAAGACCATTACAGTATGCAAGTACAAGAAAGGAGACGGGTTAGTTGAAGTTACCGATTGTTCAGTCTGTCTCAGTGAGTTTGACGAAGATGAAAACATTAGGCTCTTGCCTAAATGCAGTCATGCTTTTCATCTTCCTTGCATTGATACATGGCTCAAGTCTCACTCAAATTGTCCCTTGTGTCGTGCTAATATATTTTGTTCCAATACTTTGTCACTTCAATTGTCAACTCCAGTAATAGAAATCCCTTCAAGGATTGAAGACATTTCTGAAATTCATAATGAAAATGAAGTCTCATCTGTCGGAAGAGATCCTGACATGAGTGTCATACAAGAAGGGATACCGACGGATTACTGTAGTGTAGTCCCAAAGCCTGCATTACGTGTCTTTAGTGATTTGGGGAATTTACATGGAAGAGATACAATTATTGAAATTAAAAATGAAGGTTATGATGCTATGATCAGAAGATCAATCTCAATGGATCATTCGCTTCAAACTCAAAACAGTCTCTCAGTAGCTGATATTCTGCAAATGAATCAAGATGACGAAGACACTCATGTACAAGATCAGTACTCAACTGAGGTCGGATCTTCAAAGCAGTCACCAGGAGAAACTAGCAGGTCTGAATATAAAAGAAGGGTCCTGCATCGTGTATTGAGTCCTATAGCAATGAAGAGATCATTTTCCAGTGGCAGATTTTTGCTCTCCACACATGGTAGAGATCAACAGCAGGCTACTGTCCCTGTCTGA 1116 0.4104 MASVDDHKTWFPYMNGKGCSEGFCTFYCPQWCYIYPPPPPFEFPEDNSNRRFSPLVIVIIGVLASAFLLVSYYTLISKYCGNMDSSQTQNHDDQDEELEENHNPSLHEPWQAVTTGLDEALIKTITVCKYKKGDGLVEVTDCSVCLSEFDEDENIRLLPKCSHAFHLPCIDTWLKSHSNCPLCRANIFCSNTLSLQLSTPVIEIPSRIEDISEIHNENEVSSVGRDPDMSVIQEGIPTDYCSVVPKPALRVFSDLGNLHGRDTIIEIKNEGYDAMIRRSISMDHSLQTQNSLSVADILQMNQDDEDTHVQDQYSTEVGSSKQSPGETSRSEYKRRVLHRVLSPIAMKRSFSSGRFLLSTHGRDQQQATVPV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00691 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 190 IPR013083 -
Pte14g00691 371 MobiDBLite consensus disorder prediction 89 104 - -
Pte14g00691 371 PANTHER RING-H2 FINGER PROTEIN ATL16 40 328 IPR044600 GO:0016567|GO:0016740
Pte14g00691 371 Pfam Ring finger domain 141 184 IPR001841 -
Pte14g00691 371 CDD RING-H2_EL5-like 141 184 - -
Pte14g00691 371 MobiDBLite consensus disorder prediction 307 334 - -
Pte14g00691 371 FunFam RING-H2 finger protein ATL54 117 190 - -
Pte14g00691 371 SMART ring_2 142 183 IPR001841 -
Pte14g00691 371 MobiDBLite consensus disorder prediction 312 326 - -
Pte14g00691 371 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Pte14g00691 371 SUPERFAMILY RING/U-box 141 189 - -
Pte14g00691 371 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00691 Pte-Chr14 27951673 27954722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00691 1 349 C3H Transcription Factor Family AT3G03550 37.726 2.93e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00691 - - qsa:O6P43_033328 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00691 14 27951673 27954722 Pte14g00691 14 27951673 27954722 RCT