Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00686 ATGGCGTCCGACAACTCCACAGACAAAAACACCATTTTCAGAAAGCTCAAAGCTAAGTCGGAAAACAAGATGTGTTTCGACTGTAATGCAAAGAATCCAACTTGGGCTTCCGTCACTTATGGGATCTTCCTTTGCATCGATTGCTCTGCTGTACATCGCAGTCTCGGCGTCCACATTAGCTTTGTGAGGTCCACAAACTTGGATTCTTGGACCCCTGAGCAGCTAAAAACTATGAGCTTTGGGGGAAACAACCGTGCACAAGTTTTCTTTAAGCAACATGGCTGGACTGATGGTGGTAAGATAGAGGCTAAGTATACATCTAGAGCTGCTGATCTGTATAGGCAGCTTCTTTCTAAGGAAGTAGCCAAAAGCATGGCAGATGATGCAAGCCTGCCATCATCTCCTATTGCTGCTCAGTCATCACAAAGTACTAATGGGCTACCTGATGTCAGTATGAGCAAACTGCCGACAGAAATCTCTCTCGAGAAGCAAGAAGCTGTGGAGACAACATCTTCACCAAAAGCTTCGAATATAATTCTTTCTACTACTGTCAAGAAGCCCATCGGTGCAAGGAAAACGGGAAAAACTGGGCTTGGTGCTAGAAAACTTACTTCCAAGCCAAGTGATTCTCTATATGAGCAGAAGCCTGAGGAACCAGTTGCTCCAGTTTCATCCTCAACAAACAACACTCCATCGGCACGGCCATCCTTGACATCTAGATTTGAGTATGTTGACAATGTTCAATCTTCTGAGGGGAATAATGAAGGTGCACATGCGATAGCCCATGTCCTTCCACCAAAATCATCTAGTTTTTTTGCTGACTTTGGAATGGATGGTGGTTTTCCTAAGAATTCAAATCCAAGTTCCTCAAAATTGCAAATTGAAGAGACTGATGAAGCGAGAAAGAAGTTCTCAAATGCAAAATCTATCTCTTCAGCTCAATATTTTGGGGATCATAATCAAGTTACTAATTTGGATGCTCAAGCTTCGTTACAGAAGTTCTCGGGTTCAAGTGCCATCTCAAGTTCTGATCTTTTCGGTCATGACTCCATCAACACTGTAGATCTTACTGCAAGTGACCTGATAAATAGACTCTCTTTCCAGGCACAGCAGGATATCTCTTCGCTGAAAAATATTGCAGGAGAAACTGGAAAGAAACTCAGCTCCTTGGCATCCTCTCTAATGACAGATTTTCAGGATAGAATCCTCTAA 1212 0.4299 MASDNSTDKNTIFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKTMSFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAADLYRQLLSKEVAKSMADDASLPSSPIAAQSSQSTNGLPDVSMSKLPTEISLEKQEAVETTSSPKASNIILSTTVKKPIGARKTGKTGLGARKLTSKPSDSLYEQKPEEPVAPVSSSTNNTPSARPSLTSRFEYVDNVQSSEGNNEGAHAIAHVLPPKSSSFFADFGMDGGFPKNSNPSSSKLQIEETDEARKKFSNAKSISSAQYFGDHNQVTNLDAQASLQKFSGSSAISSSDLFGHDSINTVDLTASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLMTDFQDRIL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00686 403 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Pte14g00686 403 MobiDBLite consensus disorder prediction 133 151 - -
Pte14g00686 403 MobiDBLite consensus disorder prediction 220 238 - -
Pte14g00686 403 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Pte14g00686 403 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Pte14g00686 403 CDD ArfGap_ArfGap2_3_like 8 123 - -
Pte14g00686 403 MobiDBLite consensus disorder prediction 189 238 - -
Pte14g00686 403 Pfam Putative GTPase activating protein for Arf 11 108 IPR001164 GO:0005096
Pte14g00686 403 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Pte14g00686 403 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Pte14g00686 403 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Pte14g00686 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 4 403 - -
Pte14g00686 403 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Pte14g00686 403 Gene3D Arf GTPase activating protein 1 137 IPR038508 -
Pte14g00686 403 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00686 Pte-Chr14 27912175 27917129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00686 6 91 C2H2 Transcription Factor Family AT3G07940 44.828 1.80e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00686 K12493 K11855 gmx:100785169 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00686 14 27912175 27917129 Pte14g00686 14 27912175 27917129 RCT