Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00666 ATGGGAAGAGGGAAGATTGTGATCCAGAGGATCGACGATATTACAAGCAGGCAAGTGACCTTTTCAAAGCGTAGAAAGGGATTGATCAAGAAAGCAAAGGAATTGGCTATTCTCTGTGATGCTGAGGTTGGACTTATTATATTCTCCAGCACTGGAAAGCTCTACGAATACGCAAGCACCAGCATGAGAGCAGCCTTTGAGAGGTATAACAAAGCAAAAGAGGAGTACGAACTGTTGAATCCAGAATCAGAAATTAAGGTTTTGCAAAGGGAAGCAGAAATGTTAAGGCAGCAGCTCGAGAGCTTGCAAGAAAATTATCGTTTGTTGATGGGACAACAACTCTGTGGGTTGGATATCAGGGAACTACAGAATCTAGAGAATCAATTGGAGATGAGCCTTCGAGGCATCCGCATGAAAAAGGAACAAGTTTTAGTAAATGAAATCCAAGAGCTCACAGAGAAGGGTAATCTAATTCATCGAGAAAATCTTGAACTCTACAAAAAAGTGAACACCATTCGACAAGAAAACATGGAGTTATACAGGAAGGTATGTGGTGGAACTATGGAGGTTCCTGCAAGAACCACCTTTGTACCAAATGGTGTCCATGCTAGAGAAGACCCAATTATGCCAGTTGCAGCAATCCAACTTCAATTATGCCAGCCTGAGCAACAAATCAATGAGACATCAGTTGTTGCAAAACAATGA 705 0.417 MGRGKIVIQRIDDITSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYEYASTSMRAAFERYNKAKEEYELLNPESEIKVLQREAEMLRQQLESLQENYRLLMGQQLCGLDIRELQNLENQLEMSLRGIRMKKEQVLVNEIQELTEKGNLIHRENLELYKKVNTIRQENMELYRKVCGGTMEVPARTTFVPNGVHAREDPIMPVAAIQLQLCQPEQQINETSVVAKQ* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00666 234 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pte14g00666 234 CDD MADS_MEF2_like 2 74 IPR033896 GO:0000977|GO:0045944
Pte14g00666 234 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Pte14g00666 234 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Pte14g00666 234 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Pte14g00666 234 SUPERFAMILY SRF-like 2 75 IPR036879 GO:0003677|GO:0046983
Pte14g00666 234 Pfam K-box region 84 169 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pte14g00666 234 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 167 - -
Pte14g00666 234 Coils Coil 122 142 - -
Pte14g00666 234 Gene3D - 13 94 IPR036879 GO:0003677|GO:0046983
Pte14g00666 234 Coils Coil 85 112 - -
Pte14g00666 234 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Pte14g00666 234 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Pte14g00666 234 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Pte14g00666 234 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00666 Pte-Chr14 27729798 27736108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00666 1 229 MADS-box Gene Family AT2G22630 63.948 3.68e-96 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Pte14g00666 K-box 5.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00666 K09264 - qsa:O6P43_025186 298.13