Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00664 ATGGCGAAGATGGCTGAACTAAGAAAATGGATACTATTCCTGTGTTGCTTAGGATTGACTGCAAATGTGTTGTTTAAGCCAGCTGACTGTTCTCATGATCAGAATCCTCTGATTAGAGAGGCTTCAGTTGACTCCATCAATGTCATCAAAACATTGGAATCATCTCCAGGGGTTGTGATGGACAATGGTATTCTTCGAATGACTCTGTCGCACCCAGATGGTGACGTTATCGGGATAGCATACAATGGAGTTGATAATATTCTCGAAGTGCGCAACCCTTTATACAATAGAGGAGTTCAAACTCTGCGCAAAATGTTTTTCTTCAGAGCCCAAGGAACAAAATATTCTGTGGTAACGTCAAATGAGAATCAAGTGGAAATTTCATTTTCAAGAACCTGGTCAAATGATTCCACCAGTATTCCCTTAAACATAGACAGAAGTTTCTGGTATGTATATAATTTTCTTGATCACTTGATTAGAGGTAATACTAAATTCAAATTGCATGCATGGCACAGGTTTCATTACATGGCTTTGTCCAGTGAAAGACAAAGGGTCATGCCGACACAAGATGACCGGAGATATGGTCAAACACTTGCATATGGGGAGGCTGTTCGTTTGACTAATCCTGAAAACCCGTACCTCAAAGGAGAGGTTGACGACAAATACCAATACTCTTGTGAGAACAAAGATAACAAAGTTCATGGTTGGACAAGCTTAGGTATGAGCCCATCAATTGGGTTTTGGTTGATCACTCCCAGTGAGGAATTTCGTATGTTTGGACCCTTTAAGCAAGAACTCACCTCCCATGTCGGTCCGACCACACTTGGGATGCTTGTGAGTGCACACTACTCAGGGAAGGGATCGTCCATGAATTTTGAAGATGGGGAGCCCTGGAAAAAAGTTTATGGCCCCTTCTTTGTCTATCTCAACTCGAACCGAAACATGACCGATGTACATAGCTTATTCGACGATGCTGAGAAACAGATGAGAAGAGAAGAAAAGACTTGGCCATATGATTTCCCTCAGTCAAAAGATTATCTACAAGCAGATCAAAGGGGGAGTGTAGCTGGCAAGTTATTTATCAATGACACATTCATTAGTAAAAAACTCATAAAGGCCGATGGTGCTTACGTGGGTCTCGCTCTTCCAGGAGATGTAGGTTCATGGCAGACAGAAAACAAGTCAGACTCATGTACACTTCAAAACTCATCCCTGTGTACTGGAAACGCCTGCAGGGTTACCAATTCTGGACTCGGACTAACAAGAAAGGGGCCTGGCAACTACAGCTTATATGCATGGGTTCCTGGTTTCATTGGTGATTACAAATATGAGACTTTGATTACAATCAAACCAGGTAGCAATGTCTCCTTTAATTCTTTAGTGTATAACCCACCAAGAAATGGTCCTACCATTTGGGAAATTGGCATTCCAGACCGTTCAGCTGCTGAGTTCTATGTGCCAGACCCTTATCCTACACTGGTCAATAAGCTCTACTTGAGAAGTTCATCACAAAAGTTTAGGCAATATGGACTATGGGACCGCTACACAGACTTGTATCCCCATCAAGATCTGCAATACACCATTGGAAGTAGTGACTATCGTAGAGATTGGTTCTATGCCCATCTAAACAGGAAAACAGTAAATGGTACATACACACCCACTACATGGCAGATTAAATTCAAATTAGATTTATACCAAAGAAACTTGAGATCTAGAGGAAACTACACACTTCACTTAGCCCTAGCAGCAGCTAATGAAGCTGACTTACAGATTCGGACCAACTACTACATGAGACGACCAATGTTCCACACTGGACTAATTGGCAGAGACAACGCCATAGCAAGGCATGGCATTCATGGATTATATCGGCGGTATAGCATTACCATACCAAGTTATTTGCTCATAAACGGGAACAACACAATCTATTTGACACAGAATAGAGGTCAAACTCCCTTTGAGGGTGTAATGTATGACTATCTCCGTTTAGAAGGACCTTCAACCATTACGACTATTGCTTCAATTAACAAATCAGCAACCTATTTTCAGGTGGTGCTGGATAATACCCTCCTCAAATTGACTCTATCAAATCCTGAAGGAGATGTCATTGGAGTGACGTATCAAGGAGTTAATAATCTGCTTGAAACTCGAAATGCAGAAAATGATAGAGGGTATCTAATTCGAATAAAGGGGACAACATTTAAAGTTGTAGTAGCAAGTAAGGATCAAGTAGAGGTTTCATTTTCAAGGACATGGAACTTGTCCTTGAGAGGCTCAAGTGTTCCTTTAACAATTGATAAAAGGTATGTAATGCTACGAGGCAGTTCAGGATTTTACTCCTACGCCATTTTCGAGCGACCAGAAGGCTGGCCAGCTATGCAGATTGAGCAAATTAGGATAGTGTATAAGCTGGATGAGGACATGTTTCACTACATGGCTGTCTCTGACAAAAGGCAAAGAATCATGCCAATGATGGAGGATCGCAACACAGGTCAGACTCTTGCTTTCCCAGAGGCTGTCCTCTTGACAAAACCTATTAACCCTAATCTGAGAGGAGAGGTGGATGATAAGTACCAATATTCTTGTGAGAACAAAGACAACAGAGTACATGGCTGGATCAGCAGTAATGCCACTCAAGGTAAATCATTGGGTTTGTGGATGATAACACCTAGCAATGAGTTTCGTCATGGTGGACCAATCAAGCAGGATCTAACTTCTCATGTTGGCCCTTACGTCCTCTCCATGTTTGTTAGTCTGCACTATGCTGGGAAGAAAGTAGCAATGTCTTTCCAAAATGGTGAGCCATATAAAAAGATCTTTGGCCCTGTTTATGTCTATCTTAATTCAATATCAGGTCGGGACAACCACCTCCCTCTTTGGAATGATGCAAAAAGACAGATGTCCACTGAAGTCAAAAGCTGGCCTTATGCTTTCCCTCAATCTAAAGATTTTCTAAAAGCTGATCAACGGGGACGCATTGCTGGACAATTGCTTGTAGATGATAGGTACATTAAGGCAGGACTCATGGAGGTTAGCTCTGCTTTCGTTGGTCTTGCTCTACCTGGAGAAGTAGGATCATGGCAAAGAGAAAGCAAAGGCTATCAATTTTGGAGCCAAACTGATAAGAAAGGAAACTTCTTGATCTCCAACGTTCTACCCGGCAAGTATAACTTGTACGCTTGGGTTCCGGGGGTAATAGGCGATTATCGTTATGAGAACGTCATTATAATCACACCAGGTATCAATGTCTCCTTGAATTCTTTAGTGTATAACCCACCAAGAAATGGTCCTACCATTTGGGAAATTGGCATTCCAGACCGTTCAGCTGCTGAGTTCTATGTGCCAGACCCTTATCCTACACTGGTCAATAAGCTCTACTTGAGAAGTTCATCACAAAAGTTTAGGCAATATGGACTATGGGACCGCTACACAGACTTGTATCCCCATCAAGATCTGCAATACACCATTGGAAGTAGTGACTATCGTAGAGATTGGTTCTATGCCCATCTAAACAGGAAAACAGTAAATGGTACATACACACCCACTACATGGCAGATTAAATTCAAATTAGATTTATACCAAAGAAACTTGAGATCTAGAGGAAACTACACACTTCACTTAGCCCTAGCAGCAGCTAATGAAGCTGACTTACAGGTACGCATCAACGACCCCAAAATGGGGCGTCCTCACTTTTTTACGGGGGCAATAGGCGATGACAGCGCCATTGCAAGGCATGGCATTCATGGATTGTACAGCCTATTCAGCGTTGGCATACAGGGCAATGTACTTGTTAATGGAAATAATACAATCTACTTGACACAGTCAAAAAATGAGGCTGCCTTTACAGGAATAATGTATGACTATATTCGCTTAGAAAGTCCTCCAGATAGATAA 3891 0.4194 MAKMAELRKWILFLCCLGLTANVLFKPADCSHDQNPLIREASVDSINVIKTLESSPGVVMDNGILRMTLSHPDGDVIGIAYNGVDNILEVRNPLYNRGVQTLRKMFFFRAQGTKYSVVTSNENQVEISFSRTWSNDSTSIPLNIDRSFWYVYNFLDHLIRGNTKFKLHAWHRFHYMALSSERQRVMPTQDDRRYGQTLAYGEAVRLTNPENPYLKGEVDDKYQYSCENKDNKVHGWTSLGMSPSIGFWLITPSEEFRMFGPFKQELTSHVGPTTLGMLVSAHYSGKGSSMNFEDGEPWKKVYGPFFVYLNSNRNMTDVHSLFDDAEKQMRREEKTWPYDFPQSKDYLQADQRGSVAGKLFINDTFISKKLIKADGAYVGLALPGDVGSWQTENKSDSCTLQNSSLCTGNACRVTNSGLGLTRKGPGNYSLYAWVPGFIGDYKYETLITIKPGSNVSFNSLVYNPPRNGPTIWEIGIPDRSAAEFYVPDPYPTLVNKLYLRSSSQKFRQYGLWDRYTDLYPHQDLQYTIGSSDYRRDWFYAHLNRKTVNGTYTPTTWQIKFKLDLYQRNLRSRGNYTLHLALAAANEADLQIRTNYYMRRPMFHTGLIGRDNAIARHGIHGLYRRYSITIPSYLLINGNNTIYLTQNRGQTPFEGVMYDYLRLEGPSTITTIASINKSATYFQVVLDNTLLKLTLSNPEGDVIGVTYQGVNNLLETRNAENDRGYLIRIKGTTFKVVVASKDQVEVSFSRTWNLSLRGSSVPLTIDKRYVMLRGSSGFYSYAIFERPEGWPAMQIEQIRIVYKLDEDMFHYMAVSDKRQRIMPMMEDRNTGQTLAFPEAVLLTKPINPNLRGEVDDKYQYSCENKDNRVHGWISSNATQGKSLGLWMITPSNEFRHGGPIKQDLTSHVGPYVLSMFVSLHYAGKKVAMSFQNGEPYKKIFGPVYVYLNSISGRDNHLPLWNDAKRQMSTEVKSWPYAFPQSKDFLKADQRGRIAGQLLVDDRYIKAGLMEVSSAFVGLALPGEVGSWQRESKGYQFWSQTDKKGNFLISNVLPGKYNLYAWVPGVIGDYRYENVIIITPGINVSLNSLVYNPPRNGPTIWEIGIPDRSAAEFYVPDPYPTLVNKLYLRSSSQKFRQYGLWDRYTDLYPHQDLQYTIGSSDYRRDWFYAHLNRKTVNGTYTPTTWQIKFKLDLYQRNLRSRGNYTLHLALAAANEADLQVRINDPKMGRPHFFTGAIGDDSAIARHGIHGLYSLFSVGIQGNVLVNGNNTIYLTQSKNEAAFTGIMYDYIRLESPPDR* 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00664 1296 CDD RGL4_N 682 948 - -
Pte14g00664 1296 CDD RGL4_M 988 1087 IPR029413 -
Pte14g00664 1296 Pfam Rhamnogalacturonate lyase family 676 853 IPR010325 -
Pte14g00664 1296 Pfam Rhamnogalacturonate lyase family 47 218 IPR010325 -
Pte14g00664 1296 CDD RGL4_C 1099 1291 - -
Pte14g00664 1296 Pfam Polysaccharide lyase family 4, domain III 1097 1290 IPR029411 -
Pte14g00664 1296 Pfam Polysaccharide lyase family 4, domain III 470 662 IPR029411 -
Pte14g00664 1296 CDD RGL4_C 472 663 - -
Pte14g00664 1296 SUPERFAMILY Starch-binding domain-like 987 1083 IPR013784 GO:0030246
Pte14g00664 1296 SUPERFAMILY Galactose mutarotase-like 679 948 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pte14g00664 1296 SUPERFAMILY Galactose-binding domain-like 1094 1291 IPR008979 -
Pte14g00664 1296 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 679 1294 - -
Pte14g00664 1296 Pfam Polysaccharide lyase family 4, domain II 1012 1081 IPR029413 -
Pte14g00664 1296 Pfam Polysaccharide lyase family 4, domain II 425 455 IPR029413 -
Pte14g00664 1296 CDD RGL4_N 53 312 - -
Pte14g00664 1296 FunFam Rhamnogalacturonate lyase B 985 1084 - -
Pte14g00664 1296 SUPERFAMILY Galactose-binding domain-like 467 663 IPR008979 -
Pte14g00664 1296 Gene3D - 985 1085 - -
Pte14g00664 1296 Gene3D - 468 663 - -
Pte14g00664 1296 Gene3D - 1095 1291 - -
Pte14g00664 1296 Gene3D - 50 321 IPR014718 GO:0030246
Pte14g00664 1296 Gene3D - 673 948 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00664 Pte-Chr14 27607483 27712453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00664 58 667 Polysaccharide Lyase AT1G09910 51.719 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00664 K18195 - egt:105954846 895.96