LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte14g00662	ATGGCGAAGCAATTAGCAGAAGAGAGAGGCCTACTTACAAGAGAAGCCTTTGGATGGGCAGCCAGAGACCCTTCTGGTTTCCTTTCACCCCTCAACTTCTCTAGAAGAGTTACAGGGGAAAAGGATGTGACCTTCAAAGTGTTGTACTGTGGAATATGTCACTCAGACCTTCATTTTATCAAGAATGACCACGGGTTTACTCAATACCCTCTTGTCCCTGGGCATGAGATCGTTGGTGAAGTGACTGAGGTGGGTGAAAAGGTCAAAAAGTTCAAAGTCGGGAACAAGGTTGGTGTTGCAGGTATAGCAGGATCCTGCGGAGCTTGTAGTGACTGCAGAAACTATCTTGAAGTCTATTGCACACAAGGGATACTAACATACGGTGGAAAAGACTGCGATGGCAACACCACACAAGGAGGGTTTTCCGATATCATGGTCGTAGATGAGCACTTCGCTTTTCAAATTCCAGACAATCTACCACTGGATGCTGTTGCCCCCCTTCTTTGTGCAGGGATTACTGTGTACAGTCCATTGAGACGTTTTGCTCTTGACAAGCCTGGTGTGCATGTTGGGGTCGTTGGCCTGGGTGGGCTAGGTCATATGGCTGTTAAGTTTGCCAAAGCCTTTGGAGCTAAGGTCACTGTCATCAGTACCTCTCCTAATAAGAAAGAAGAAGCTATACAACATTTAGGGGTTGACTCGTTTTTGATCAGTCATGAACAAGATCAGATGCAGGCTGCCATGGGGACTTTGGATGGCATCATTGACACAGTTTCTGCTGCCCATCCAATCTTAGACCTAGTGATGTTGCTTAAGTCTCACGGAAAGCTTATCCTTGTCGGCGCACCGGAGAAGCCTCCGGAGCTACCTGTCATGCCATTGCTTATGGGAGGAAAATTGGTAGCTGGTAGTGCAGGAGGAGGGAGCAAAGAAATGCAAGAAATGATGGATTATGCTGCTGAAAAGAATATCGTGGCTGACACTGAAGTTATATCCATGGATTATGTCAACACAGCAATGGAACGCCTTGCTAAAGCTGATGTCAAATATCGTTTCGTCATAGACATCGGGAACACGTTGAAGACCAGTTCTTAG	1095	0.4648	MAKQLAEERGLLTREAFGWAARDPSGFLSPLNFSRRVTGEKDVTFKVLYCGICHSDLHFIKNDHGFTQYPLVPGHEIVGEVTEVGEKVKKFKVGNKVGVAGIAGSCGACSDCRNYLEVYCTQGILTYGGKDCDGNTTQGGFSDIMVVDEHFAFQIPDNLPLDAVAPLLCAGITVYSPLRRFALDKPGVHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKEEAIQHLGVDSFLISHEQDQMQAAMGTLDGIIDTVSAAHPILDLVMLLKSHGKLILVGAPEKPPELPVMPLLMGGKLVAGSAGGGSKEMQEMMDYAAEKNIVADTEVISMDYVNTAMERLAKADVKYRFVIDIGNTLKTSS*	365

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte14g00662	364	Gene3D	-	170	326	-	-
Pte14g00662	364	FunFam	Putative cinnamyl alcohol dehydrogenase 6	327	356	-	-
Pte14g00662	364	Gene3D	-	19	356	-	-
Pte14g00662	364	SMART	PKS_ER_names_mod	26	354	IPR020843	GO:0016491
Pte14g00662	364	Pfam	Zinc-binding dehydrogenase	197	319	IPR013149	-
Pte14g00662	364	ProSitePatterns	Zinc-containing alcohol dehydrogenases signature.	74	88	IPR002328	GO:0008270\|GO:0016491
Pte14g00662	364	PANTHER	ALDEHYDE REDUCTASE	14	359	IPR047109	GO:0016616
Pte14g00662	364	FunFam	Cinnamyl alcohol dehydrogenase	170	326	-	-
Pte14g00662	364	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	159	324	IPR036291	-
Pte14g00662	364	SUPERFAMILY	GroES-like	22	187	IPR011032	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte14g00662	Pte-Chr14	27531976	27534051	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte14g00662	11	361	Monolignol Biosynthesis Gene Families	AT4G37990	65.527	4.45e-153	433

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte14g00662	K23232		-	fve:101297378	483.796

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte14g00662	14	27531976	27534051	Pte14g00662	14	27531976	27534051	RCT

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