Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00652 ATGGATGGTCCAGCAGAGAAAGTATACGTAGCTGTTGGAAGTGATGCACAAGATGGATTTAAGACCTTGGAATGGACTCTGAAGAAATGGAAGTCTTCTCCAATCTCCATTGTCATTCTCCATGTGATTCATAAAGTTCAGACTGAATATGTTCATACCCCATTTGGGAAGCTCCCTGCAAGATATGTCAGTGAGGAGAAACTTGAAGACATCAGGAAATGTGAGCAGGAGAAGATAGACAAGCTGTTATCTAGTTATGTGTCTTTCTGCGGCAAGGTTCATGCTGAAATACACAAAGTAGAAAAAATTGACGAACCAATTCACAGGACTGTCATAGATTTGATCTCTGGTCTGAAAATAACAAAGTTGGTCTTGGACTTCTCTTTCATGAAGCAATCATGGAAAGCAAGGGGTGCCATAAGTGGTTCATTTTATGTCCATCAGCACAAGCCTGATTTCTGCGAACTGTTCATAATATGTGGAGGAAAGCAAGTGTATCTGAAAGGAAACCAAGACCAGAAGATCATAGAGGATGACAACGGAGTCATGATTGGTAAAGAGAGAGAGAAGGTGACCTTCAAAGATTGGATAGAGAAGATGCTCATGGATAACATGACTAATATATCAGACAAAAGTTTTCGCCAATCACGTTCTTCAAAGAATTTGGGTTCAAGCACAACACAGGATCAATGGGAATTCAACCTAGAGGAAATTGAGAAGTACTTTCAGGAACTGTTTTCCTCAACCTCAAGTCTTGACCAAGATATCCCTGATAAAAAAAAAGACATCTTGCAGATTGATCAACCAGGAATTCCAAAAGAGAACAACTCTAATATGACTGATGCAGAAAAAGTGGAGAACCTAAAAAGCAAACTTAGTGCAGCAGAAAATATTATCCAATTGAAGAAAGAAGACACCAAGGCTAATTTGGATAGGCAATCGAAAGCTGAATGGGCCATTTGTTTATGCAATCGCAGGGCTGAAGAAATTGAAGCTGGACTAAAGGAAGAAGTGAATAATAGAGAAGACCTGAGTAAAGCACTAGATTTAGAAAAGGAACTGCTGAATGAGATTACTAGTGATGTTGAAGAGAGCAAGAAGAGGCTGAATGCACTTTTGGACTTTCAATCACAGCTTTCAAACAAGCTTCACATGTCCACATTGGCTAAGTCACATGCTGAATCTCAACTAGAAAAGGCAGTGACTACAAGGTCAGAGATGCTGAGGGAGATTGAAGAACTGAGAAAATTCAGAGATGTGCTTCGTAGAAGGATTGAGTTTTGTAAAGAAAAAGATGCCATAGGAACGGTTGCTAGGCAAAATGAAGTTAGCTTTGCTTTTAGGGAGTATTCCCTTGAAGAGATCAGATTGGCTACAGATGATTTCTCAGAACGTGTGAGGTTGAAATCTCGAGGAGACTGGACCAATGTGTATCGTGGACGCATTAGTCACACAAGTCTAGCAATCAAGATGCTCAATGCACCAAACTTGTCCAACCAAGATTTTTTAACCAAGGTGAAGCTAATTAGCAGCATTAGGCAACCACATTTGGTTGCCATAATGGGCTTCTGCGCCCAGTTAAAATGCATTGTGTATGAATACATGCACTATGGCAGTTTACAAGACTTGCTATTTTCCTACCCGAAGAGAAGAAACCGAACTCTAAAGTGGCATGACCGTATACGTATCGCTACTGAGGTGTGCTCGGGCCTGGCCTTTCTTCACCTAGCCCGGCCCAAACCACTTGTTCATGGATCCCTTTCATCATCAAACATCCTCTTGGATCGTAACCTCGTTGCCAAGATTGGTAGTTTCGGGTTCAGCCCAAACTACAGCCAAGGAGATCTTCGAACTGATATTCATGCACTAGGAATTCTCATGCTACAACTTCTAACGGGAAGGAATTGGGCTGGGCTTGTGGAGACGGCGGCAATGACGGATAAAGAGGCAGTTATCAAGGCGTTGGATGAGATGGCTGGACGATGGCCATTGGATCTTGTGGAAGAGTTTTTGGGCCTAGCATTGAGGTGCATGTCCATTAAGAATGAGGCCAATATAGAACTGAACATCGAATGTGTTGCTAAAGATCTCAATGAGTTGAAGAGCAAAAGTGACAAACTAGTTGGAAGACATGGACGGTTCGTTAGCAAACAGGCAGATAGCCAAGATGTTCCCAATGTTTTCCTGTGTCCTATCTTTCAGGAGGTGATGAAAAATCCGTACATAGCAGCAGATGGATTCTCATACGAGTTAGAAGCGATAGAGGAATGGATACAGACGGGTCATGACACATCGCCAGTTACAAATTCACGGCTGAACCATACATTCTTGACTCCCAACCACACCCTAAGATCACTTATTGAGGACTGGCAAACAAAAAGATCAAATTCAACAGATTCAAGACCGTGA 2409 0.4193 MDGPAEKVYVAVGSDAQDGFKTLEWTLKKWKSSPISIVILHVIHKVQTEYVHTPFGKLPARYVSEEKLEDIRKCEQEKIDKLLSSYVSFCGKVHAEIHKVEKIDEPIHRTVIDLISGLKITKLVLDFSFMKQSWKARGAISGSFYVHQHKPDFCELFIICGGKQVYLKGNQDQKIIEDDNGVMIGKEREKVTFKDWIEKMLMDNMTNISDKSFRQSRSSKNLGSSTTQDQWEFNLEEIEKYFQELFSSTSSLDQDIPDKKKDILQIDQPGIPKENNSNMTDAEKVENLKSKLSAAENIIQLKKEDTKANLDRQSKAEWAICLCNRRAEEIEAGLKEEVNNREDLSKALDLEKELLNEITSDVEESKKRLNALLDFQSQLSNKLHMSTLAKSHAESQLEKAVTTRSEMLREIEELRKFRDVLRRRIEFCKEKDAIGTVARQNEVSFAFREYSLEEIRLATDDFSERVRLKSRGDWTNVYRGRISHTSLAIKMLNAPNLSNQDFLTKVKLISSIRQPHLVAIMGFCAQLKCIVYEYMHYGSLQDLLFSYPKRRNRTLKWHDRIRIATEVCSGLAFLHLARPKPLVHGSLSSSNILLDRNLVAKIGSFGFSPNYSQGDLRTDIHALGILMLQLLTGRNWAGLVETAAMTDKEAVIKALDEMAGRWPLDLVEEFLGLALRCMSIKNEANIELNIECVAKDLNELKSKSDKLVGRHGRFVSKQADSQDVPNVFLCPIFQEVMKNPYIAADGFSYELEAIEEWIQTGHDTSPVTNSRLNHTFLTPNHTLRSLIEDWQTKRSNSTDSRP* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00652 802 SUPERFAMILY RING/U-box 720 796 - -
Pte14g00652 802 PANTHER OS02G0152300 PROTEIN 8 788 - -
Pte14g00652 802 SMART Ubox_2 727 790 IPR003613 GO:0004842|GO:0016567
Pte14g00652 802 Coils Coil 285 305 - -
Pte14g00652 802 Coils Coil 327 368 - -
Pte14g00652 802 ProSiteProfiles U-box domain profile. 723 797 IPR003613 GO:0004842|GO:0016567
Pte14g00652 802 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 722 800 IPR013083 -
Pte14g00652 802 ProSiteProfiles Protein kinase domain profile. 463 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte14g00652 802 Pfam Protein tyrosine and serine/threonine kinase 471 612 IPR001245 GO:0004672|GO:0006468
Pte14g00652 802 Coils Coil 411 431 - -
Pte14g00652 802 SUPERFAMILY Protein kinase-like (PK-like) 443 681 IPR011009 -
Pte14g00652 802 CDD RING-Ubox_WDSUB1-like 725 780 - -
Pte14g00652 802 Pfam U-box domain 724 795 IPR003613 GO:0004842|GO:0016567
Pte14g00652 802 Gene3D Phosphorylase Kinase; domain 1 434 534 - -
Pte14g00652 802 Gene3D Transferase(Phosphotransferase) domain 1 537 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00652 Pte-Chr14 27367568 27371379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00652 6 800 U-box Gene Family AT5G65500 47.708 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte14g00652 PK_Tyr_Ser-Thr 5.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00652 - - qsa:O6P43_033248 1052.35