Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00651 ATGGCTCCAACAAATAATTGGTTGTCCTTCTCTTTGTCTCCCATGGAAATGCTGAGCTCCTCTGGTGATTCACAGTTCGTTTCTTATGACCAGAGCTCTTCAGTTCCCGCTTCACATAATTACTTTGTCGATAATTTCTATGAAAATGAACAAGATAAAGAAGGGAAAGAAGACCAAGCTCATAGCATGGCAGACCCTTTGATGAAGAGAAGCTTCATCGTCCCAGAAAACCAAAATAAATCAGTACAAAAGCTAGAGGACTTTTGGGCTGATCCTTCACCAACAGTAAAGTACTCTGATAGTCAAACAGAGACTCAGGATTCATCACTGACCCAAATATATGACCATGGCTCTGCCTACTTCAATGACCTGCAAAATCTGAAACCAATGACTATGTTTCAAGCTTTTTCTTACTACTCAGGGTCTGAAGTCGACGACTCATTCTCAATCGGTAGAAGTCAACTCGGGGAAAGTTCTGGCGAGTTTGCAGGTCATTCAATCGATCAGCCACCCGGGAAGGGACTGGTTTTCTCCAGTTGCACCGGTAAATTGTCTCTTGCAGTCACCCAGAGTTCAGAAAAGGCCATTGTTTCTGTGGATTCAGATAGCAAAAAGAAAATTCCTGATACTTTTGGCCACCGAACCTCAATTTACAGAGGAGTCACCAAACACAGATGGACAGGTAGATATGAAGCCCATCTATGGGATAACAGTTGTAAAAGAGAGGGTCAGGCAAGAAAAGGGCGACAAGTCAATTTGAAATTGTCATATTCAGGTGGATATGACAAAGAAGACAATGCTGCAAGAGCTTATGATTTAGCTGCTCTAAAATATTGGGGACCGTCGGCTACCACCAACTTCCCCGTTGACTATTACAACAAGGAACTGGAGGATATGAAACCTGTTTCCAAGCAGGAATTCATTGCATCGTTGAGAAGAAAAAGCAGTGGGTTTTCTAGGGGAGCATCTATGTACAGGGGGGTCACAAGGCATCATCAACAAGGGAAATGGCAAGCAAGAATTGGTCGTGTTGCAGGAAACAAAGACTTGTATCTTGGAACCTTTGCAACTGAGGAGGAAGCAGCGGAAGCATATGACATTGCAGCCATTAAGTTCAGAGGATTAAATGCTGTTACCAACTTTGAGATGAGCAGATATGATGTTGATGTTATTCAGAAGAGTGCTCTTCCCGTTGGTGGGGCATCAAAACGTGTGAAGCTTTCATCAGAATCAGAACAAACATCTGCAGCCAACAGCAATCTTCAATGCTCCAGCTTAGGCAGCACCATCCATTTCTCAAACGTCCAAGGAGTTCCATCTATTCCTTGTGGAATTCCTTTTGATTCTGCTACAACTTACCACCTCCAAAAAAAATTCCAACACATTCAGGCTAACAATTTCAGTGCTGCTGATTCCTCTGGTACAACCACGGCAGCATGTCCTTTGACCATACTGCCACCAGCTGCTGAATTTTTCCAGTGGCCTCGTCAGCCGTATTGA 1500 0.4353 MAPTNNWLSFSLSPMEMLSSSGDSQFVSYDQSSSVPASHNYFVDNFYENEQDKEGKEDQAHSMADPLMKRSFIVPENQNKSVQKLEDFWADPSPTVKYSDSQTETQDSSLTQIYDHGSAYFNDLQNLKPMTMFQAFSYYSGSEVDDSFSIGRSQLGESSGEFAGHSIDQPPGKGLVFSSCTGKLSLAVTQSSEKAIVSVDSDSKKKIPDTFGHRTSIYRGVTKHRWTGRYEAHLWDNSCKREGQARKGRQVNLKLSYSGGYDKEDNAARAYDLAALKYWGPSATTNFPVDYYNKELEDMKPVSKQEFIASLRRKSSGFSRGASMYRGVTRHHQQGKWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMSRYDVDVIQKSALPVGGASKRVKLSSESEQTSAANSNLQCSSLGSTIHFSNVQGVPSIPCGIPFDSATTYHLQKKFQHIQANNFSAADSSGTTTAACPLTILPPAAEFFQWPRQPY* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00651 499 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 PRINTS Ethylene responsive element binding protein signature 364 384 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 FunFam AP2-like ethylene-responsive transcription factor ANT 216 290 - -
Pte14g00651 499 SMART rav1_2 324 388 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 SMART rav1_2 217 294 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 ProSiteProfiles AP2/ERF domain profile. 217 288 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 SUPERFAMILY DNA-binding domain 216 290 IPR016177 GO:0003677
Pte14g00651 499 Gene3D AP2/ERF domain 324 384 IPR036955 GO:0003700|GO:0006355
Pte14g00651 499 Gene3D AP2/ERF domain 217 290 IPR036955 GO:0003700|GO:0006355
Pte14g00651 499 ProSiteProfiles AP2/ERF domain profile. 324 382 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 SUPERFAMILY DNA-binding domain 323 384 IPR016177 GO:0003677
Pte14g00651 499 FunFam AP2-like ethylene-responsive transcription factor 323 384 - -
Pte14g00651 499 Pfam AP2 domain 217 280 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 Pfam AP2 domain 325 374 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 CDD AP2 216 290 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 CDD AP2 323 384 IPR001471 GO:0003700|GO:0006355
Pte14g00651 499 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 80 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00651 Pte-Chr14 27351046 27355185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00651 65 500 AP2-EREBP Transcription Factor Family AT5G10510 51.992 1.17e-147 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte14g00651 AP2 9.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00651 K09285 - qsa:O6P43_025207 645.966