Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00586 ATGGTTTTGTTGGTCATGCAACCTCAACAGCAAGACCGTCAGCAATCACTGCAGAACAATAATCCTTCTGGTTTAGCTTCACAACCCAACAATCCACAATCTTCTTCTACTACTAGTACCTCCCTTAGATCACCTTCCACAGCTACAACACCTCCGGTAGCTACAATTCAATCTCACTACTTCTCATCCCCCTTTTCTTTAGCTCCGCAGCTCTACAATTCACACCATCTAGCTCTGCCAGCTGTGCTGACATTCCATTCAGATGACCAAGTTGTTAGACCGCTGGTGCCAATTGCGGTAGCCCACCCATCCGGTGAGCCTGCAACTATGGCGGAGGGTTCACTGATGAGGGTCAGATTGTCGGATATTGCTCCATATGATGGAGCGCCATCCGGGCCTTATACAAAAGCGGTCGAGGCGTTGTCGAGTTCGCTAATGAGGCATAATGCAGCTGTGATTGAGCTGGGGAGTGAAGATACGGCATTGATGCGATGTGGGTTGGAGGCAGCAAGGATGTATTTTAGAAGTAAAACTCAGCTGAATGGTGGGAAAGGCAGTCGTGGGGTTTATATGTACAGGGCAGGAAGGGCTGTGGAAGATTGGGATTCTTCTCCCCCATGTATGGCTGAGATATTTAGGTGCATGGGGATGGCTGCTCGTTTTGCTCTCTGTGCGATTGCGAGGCATCTTCGTTTGCGAAGCGATGTTTTCAATCATCTGCTGGATGATAATCCATTGCCTGCAAATGAGGTCTCTTCCTCAGCTCTTGTTGCAACATACTCACATTTGTCTGTGCAAAATGGAAAAGGGAGTGGAGGAGGTGGCAAGCCAGGTTTGCACATTGAAGTTGAGAAAGGATTGTTGACATTGATATCTTCTGATGCTCCTGGTCTTCAGGTATTTGACCCTAATGGTTGCTGGTATCTGGCTGATAGTGGCTTTGCTCCAGGGGATCTTTTACTTCTCACAGGCAAAGCTCTCGGCCATGCTACTGCTGGTCTTCGTCCTGCAGCATCATATAGATCTTCTCCAGATTACTTCTGTAGCACTAACATTGTTGGAAGGACGTCACTTGCATTTAGACTTATGCCGCAGGGCAATGCTATATTGGATTGTACGCCCATTGCAGCAGCTGGACATGTAATCCCTCAAAGCTATGCTCCCATATCCGTGAGCCAGTTTATGGATGATCTCTGTGCTGAAGAAGACTTCTTGGGCACCCAATGTGAAAATACCTATGTTACTGGGAACAATTCAAATAAAGAGCCATCACTAAGAAGTGTTCTTTCAGATCCTTTATCTGGTTCATTCCTTGAAGATGCTATGGTTGTCTCTTGTGGACATTCATTCGGTGGTCTGATGCTTAGAAGGGTTATGGAAAACTCCAGATGTACCATCTGTAATGCAGAAATTGAGACTGGTTCTCTAATCCCTAATCTCGCTCTGAGAGCTGCAGCTGCAGCCATCAAGCAAGAGGATGATCGTAGGTTGTTCCATAATGCTGCTCTTCGTAAGAGAAGGAAAGAAATGGGTGACCAACTAGATTCAATGCGAAGAACAAATAGGGAAAATGGGGATGTTGGTAGTGAAGATGGGCTACAGCGAGGTGTACAGTATCCATTTTCTGTAAATGAGAAAGTGTTTATCAAGGGAAACAAAAGGACACCTGATAAATTTGTTGGGAAGGAAGCTATCATTACATCACAGTGTCTCAATGGCTGGTACCAACTCAAGATTATTGGAACTGGAGAAAATGTTCGTCTGCAGTATCGTTCTCTTAGGAAACTTTTGAACACATCAGCTGTAGAAGTTCAGTGTGCATCACAGTCCATTCAAAATAGAAGCTCCTGA 1851 0.456 MVLLVMQPQQQDRQQSLQNNNPSGLASQPNNPQSSSTTSTSLRSPSTATTPPVATIQSHYFSSPFSLAPQLYNSHHLALPAVLTFHSDDQVVRPLVPIAVAHPSGEPATMAEGSLMRVRLSDIAPYDGAPSGPYTKAVEALSSSLMRHNAAVIELGSEDTALMRCGLEAARMYFRSKTQLNGGKGSRGVYMYRAGRAVEDWDSSPPCMAEIFRCMGMAARFALCAIARHLRLRSDVFNHLLDDNPLPANEVSSSALVATYSHLSVQNGKGSGGGGKPGLHIEVEKGLLTLISSDAPGLQVFDPNGCWYLADSGFAPGDLLLLTGKALGHATAGLRPAASYRSSPDYFCSTNIVGRTSLAFRLMPQGNAILDCTPIAAAGHVIPQSYAPISVSQFMDDLCAEEDFLGTQCENTYVTGNNSNKEPSLRSVLSDPLSGSFLEDAMVVSCGHSFGGLMLRRVMENSRCTICNAEIETGSLIPNLALRAAAAAIKQEDDRRLFHNAALRKRRKEMGDQLDSMRRTNRENGDVGSEDGLQRGVQYPFSVNEKVFIKGNKRTPDKFVGKEAIITSQCLNGWYQLKIIGTGENVRLQYRSLRKLLNTSAVEVQCASQSIQNRSS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00586 616 SUPERFAMILY Clavaminate synthase-like 206 395 - -
Pte14g00586 616 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 424 494 IPR013083 -
Pte14g00586 616 MobiDBLite consensus disorder prediction 508 529 - -
Pte14g00586 616 MobiDBLite consensus disorder prediction 7 51 - -
Pte14g00586 616 Coils Coil 500 520 - -
Pte14g00586 616 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 114 602 - -
Pte14g00586 616 SUPERFAMILY RING/U-box 425 493 - -
Pte14g00586 616 MobiDBLite consensus disorder prediction 508 531 - -
Pte14g00586 616 MobiDBLite consensus disorder prediction 1 51 - -
Pte14g00586 616 Gene3D - 134 402 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00586 Pte-Chr14 26603843 26614009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00586 425 595 Plant U-box Gene Family AT5G05230 42.197 8.35e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00586 - - qsu:112020887 823.157