Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00578 ATGGCCGCATCTTCTTCACCAGCAACTTTGTTTTCAATCAGAGAAGAGGAACAGAATCAGATGAAGCCGCACCATTCTTCCACACCATCTTCTTCAGCAGCTCCAGCTGCACCTCCTATCCAGAAGAAGAAGAGGAATCAACCTGGAAACCCAAATCCAGATGCGGAGGTGATTGCACTATCTCCCAAGACCCTAATGGCAACAAATAGATTTATATGTGAGGTGTGCAACAAAGGGTTCCAAAGAGAGCAAAACCTACAGCTACACAGAAGAGGACACAACCTGCCTTGGAAGCTAAAGCAGAAGACTACAAAAGAGCCAAAGAGAAAGGTGTATCTGTGTCCTGAGCCCACATGCGTCCACCATGACCCTTCAAGAGCTCTAGGCGACCTCACTGGCATTAAGAAACACTATTCTCGTAAACATGGTGAGAAAAAATGGAAGTGTGATAAGTGCTCTAAGAGGTATGCTGTTCAATCTGATTGGAAAGCTCACTCCAAGACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCTAGGCGAGACAGCTTTATCACCCATAGGGCTTTTTGTGATGCACTGGCTCAAGAAAGTGCAAGGCAACCTCCAAATTTGAACGCTACTCTTGGAAGTCACTTGTTTGCTAGTGGCAATATGGGGTTAGGGTTATCACAAGTGGGACCTCAGTTATCTTCCATACAAGATCAAACCAATCAGTCTAATGAAATCTTGAGGCTTGGTGGTGCTAGGTCTGCACAGTTAGATGGTCTCCTACCTTCATCTTTTCGTTCACAACAATCCGTGCCTGCTTCAGCTTTCTTCCTGCCCACTGAATCAAACCCTAATTTTCATGACCACCATCAAGAACACCAATCACAACAAGGGTTAATGCAGAACAAGCCATTTCATGGGCTGATGCAAATGTCGGATCTTCACAACAGCACAGACACTAATTCTCCTACTGGGCCTCATCTCTTCAGCCTACCATTCCTTAACAGCAATGCCAACAGCAATCATTCCAATAACAGCAACAATAGCAACCTGCCATCTTCGGCTTTACTAATTTCCGATCATTTCAACGCCGGAAATGGTAGCGGCTCCGGTGGTGGTACAGGTGGTGGAAATAACGAAGGGAACAATTTCTTCATTGGGAATGTAATAGGAAATCAAAGCTCTAGTGTTCCTTCTCTTTACAGCACAAACATCAGTGCTGCTACATCTACAGCCATGGCTCACATGTCAGCAACTGCACTGCTTCAGAAAGCAGCACAGATGGGCTCAACCTCAAGCAACAACACCACAGCTTCACTTCTGAGAAGCTTTGGGAGCTCATCATCATCATCAAAATCTGATACTAGACCCATAGTAGTTAACCCTGAAAACTATGGCTCTATGTTTTGTACGGGGAATGAGAATAATCTTCAAGATCTGGTCAACTCTTTTGCCAACGCAGCATCAGGTGGCTCTTCCATTTTCGAAAATGCAGCAGGTGGAATCCATGGTTATGAAGGTTACGAAGCAAATAGAACAAATCAAGGGCATACAGTCAGCGTTGGAGGATCTGACAGGCTGACCAGAGATTTCCTAGGTGTGGGTCAGATTGTGAGGAGTATGAGTGGAGGTGGGGTTTCACAGAGAGAGCAGCAGCTGCGTCAAAAACATCAACAACATGGGATTGCCATTAATTCCCTGGATTCTGAAAGAAATTCTGCGCCGTCAGCTCAAACTTTCGAAGGAGGAGGAAACTTTCACTGA 1767 0.4533 MAASSSPATLFSIREEEQNQMKPHHSSTPSSSAAPAAPPIQKKKRNQPGNPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLNATLGSHLFASGNMGLGLSQVGPQLSSIQDQTNQSNEILRLGGARSAQLDGLLPSSFRSQQSVPASAFFLPTESNPNFHDHHQEHQSQQGLMQNKPFHGLMQMSDLHNSTDTNSPTGPHLFSLPFLNSNANSNHSNNSNNSNLPSSALLISDHFNAGNGSGSGGGTGGGNNEGNNFFIGNVIGNQSSSVPSLYSTNISAATSTAMAHMSATALLQKAAQMGSTSSNNTTASLLRSFGSSSSSSKSDTRPIVVNPENYGSMFCTGNENNLQDLVNSFANAASGGSSIFENAAGGIHGYEGYEANRTNQGHTVSVGGSDRLTRDFLGVGQIVRSMSGGGVSQREQQLRQKHQQHGIAINSLDSERNSAPSAQTFEGGGNFH* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00578 588 Gene3D Classic Zinc Finger 52 119 - -
Pte14g00578 588 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 17 553 IPR031140 -
Pte14g00578 588 SMART c2h2final6 147 167 IPR013087 -
Pte14g00578 588 SMART c2h2final6 112 142 IPR013087 -
Pte14g00578 588 SMART c2h2final6 71 93 IPR013087 -
Pte14g00578 588 SUPERFAMILY beta-beta-alpha zinc fingers 70 167 IPR036236 -
Pte14g00578 588 MobiDBLite consensus disorder prediction 1 56 - -
Pte14g00578 588 Pfam Zinc-finger double-stranded RNA-binding 71 93 IPR022755 -
Pte14g00578 588 Gene3D Classic Zinc Finger 125 204 - -
Pte14g00578 588 MobiDBLite consensus disorder prediction 559 588 - -
Pte14g00578 588 FunFam protein indeterminate-domain 12-like 50 118 - -
Pte14g00578 588 MobiDBLite consensus disorder prediction 1 16 - -
Pte14g00578 588 ProSitePatterns Zinc finger C2H2 type domain signature. 73 93 IPR013087 -
Pte14g00578 588 ProSiteProfiles Zinc finger C2H2 type domain profile. 71 93 IPR013087 -
Pte14g00578 588 FunFam protein indeterminate-domain 5, chloroplastic-like 125 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00578 Pte-Chr14 26502342 26511002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00578 41 546 IDZ Gene Family AT2G02070 51.449 4.52e-142 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte14g00578 zf-C2H2_jaz 3.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00578 K25870 - jre:109006348 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00578 14 26502342 26511002 Pte14g00578 14 26502342 26511002 RCT