Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00572 ATGATCAACGCCGCTCAGGAAACTGTCTCCAACTTTTGCTGGGATTTACTTCAACCCAAAAACTCTTGTTATTCTCAATCCCACAGTAAGCCTAATCGTGGTACCAACTATGTTAATTCCAACAATGACCCCCTCATCGCTCGTCGCTGTGCAAACTGCGACACCACCTCTACTCCCTTTTGGAGAAATGGTCCAAGTGGCCCAAAGTCACTATGCAATGCTTGTGGAATTAGATTCAACAAGGAGGAGAGAAGAGCTAGTGCTGCCAGGACTACAATGGCGAGTAATGTTGCATCGTCAGGAGGAAATGTAATGGAGTTCAACAATCAGAACAGTTCTTGGTATTCGAACTTTCAGAATCAGAAGATGCGATGTTTCTTTCTCCGGCAATGGGCAATGAGTTTCATTTTGTCAATGACGGTGATCGCGATTCAGAGAACGGCATATCCTTCCTCTCTTGGTGGCTCAACGTCACTGACAGACCCTTCACCAAATGAATAG 501 0.4531 MINAAQETVSNFCWDLLQPKNSCYSQSHSKPNRGTNYVNSNNDPLIARRCANCDTTSTPFWRNGPSGPKSLCNACGIRFNKEERRASAARTTMASNVASSGGNVMEFNNQNSSWYSNFQNQKMRCFFLRQWAMSFILSMTVIAIQRTAYPSSLGGSTSLTDPSPNE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00572 166 CDD ZnF_GATA 49 81 IPR000679 GO:0006355|GO:0043565
Pte14g00572 166 ProSiteProfiles GATA-type zinc finger domain profile. 44 77 IPR000679 GO:0006355|GO:0043565
Pte14g00572 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 47 85 - -
Pte14g00572 166 ProSitePatterns GATA-type zinc finger domain. 50 75 IPR000679 GO:0006355|GO:0043565
Pte14g00572 166 SMART GATA_3 44 96 IPR000679 GO:0006355|GO:0043565
Pte14g00572 166 Pfam GATA zinc finger 50 84 IPR000679 GO:0006355|GO:0043565
Pte14g00572 166 Gene3D - 46 123 IPR013088 GO:0006355|GO:0008270
Pte14g00572 166 PANTHER GATA TRANSCRIPTION FACTOR 18 5 127 IPR044272 GO:0003700|GO:0009908
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00572 Pte-Chr14 26239265 26240345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00572 4 114 C2C2-Gata Transcription Factor Family AT3G50870 46.825 1.31e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte14g00572 GATA 4.8e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00572 - - gmx:100790571 146.747