Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte14g00565 | ATGGTTGCGGCAACACAGCCAAATTCACAACGTGAAAATCAACAACCACGACAACGACTACAAAGACAATCTGTATCACGACCCACCTCATCATCTGCTCAAGAGGACGCTTTGAAGAGGAATACAGATTGTGTGTACTTTCTTGCTTCTCCCTTGACATGTAAAAAGGGGACTGACTGTGAGTATCGCCACAGCGAGTATGCTCGGGTTAATCCTAGGGATTGCTGGTTCTGGTCGAATGGAAATTGCTTGAATCCAAAATGTGGATACAGACATCCTCCTCTTGATGGATTGTTTGGTTCACAGGGTGAACCTGTAACAGGACCTCCTATCCCTTCTTCACAGAATATAACAACTCCAGCAACTACTACGTCGTATGGTCCCAAATCTGTTCCGTGCATATTCTTCCTGCAGGGGCAATGCTTGAAAGGTGATAAATGTTTATTCTTGCATGGACCCAATCCGGAAATTAAAGTTCCTCAGGTTCAAGGAACTAAGCAAAAGAATGAGGCTAGGGGGCCTACAAAGACTCCTGGTAGCCTTGGAAAGTGTAATCAAGAGAAGAGGCTTCCTCAAGCAAATGTTGCAAACTCAGCTCAAGAAGGTTCTGGAGCTAAACCTGTACCAACAGTAAGAACTGCTGCTGAAACAAATAAACCTTGTGTTGAGAGGGTTGTGCCTCCACGTATAAATTTCAGTGGCAATGCTTCTATATCAAAGGCAACAAGCATTCCAGCCATTGCCTATGGGGCATCTGCTGGACAAATTAATCGTTCACATCCACCCCATTTCGCAGATCATCAAAATTTACAGCACGGTAAAGACAGTGAGGAATTTCTTAGAGAATCATCTCCTGGGTTCGATTTCGATGTTCTGGTTGATGATGATCTTAGAGATTCTGATGATTACTACCATAATGATGTCAGATATGAAAGGGGAGAAGAGAGCTTGAACCCCGTCACTGAATATGACAGATCTTCTGAAAACTATTCAATGGTTGATGTGCATAATCAAAGAAGATTTCAGGATTTGCGAACTTATGTTTCATATGATCAGATTCCAGGGCGACATCCTTGGGACCACCACATGACTTCGTCTCGGGGATTGGTCAGGGGACCAGCTCATATGGAAAGAAGAGAATACAGGAAATCTGGTAGTCCTGAGAATGTTGTCTCTGATCTTCGACATCGTTTGTCACAGCAGAGGAGAGTAAATGGTCTGAGATCAGTTGTAAGCCCTGATATTTCCCTTGATCATATTGAGGAGAGAAATTTCAGGTCGTCATCCAGAAAGGATCCAGTGAGACAACCTCTGGATGATAGATTAGTCAGCAATCGTCTGAGAGGAAGAATCAAGCTTCCAGAAAGGTCTCATGCAAATGGTGATGAAGGTCACGTTAGGGGTGGGAACAGGAGTTTATCACTTGAAAGGCCTCATCAGGAAAGACATAGAGATAGAATGAATGGAAGGATACAGAACGATTACGTTCAGGAGAGAAACTTCAGAGTTCGACAGATGAGGAGAAACATGAATGATGCTGGGAGGTCTGATATGTTTTGTCCGAAAAGTCTTGCAGAACTGAAAGCTGTTAAACATACCGAGAATAAGGAGCAACCAGTACTTGGAAAGAGAAAGAAGTTTGAGGATGATCATAAATCTACTGATTTTTCTTTTGACAGTCCGAAACCTCTTAGTGAAATCCTCAAGGAAAAGCGACAAGCTGCACCATCAGCTACTTCCCTCACTTTCAGATCATACAACAACAAACAAGAGAAGAAGATTGATGAAAACGAGGACATCAAAATAAATGGCTCAGCTAATAAGGATGTCACACGAACACAAAGTGGCTTTGCATCCATGGTCAAGGAAAATGTCAATATTGATGTAACTGAAAACGTTGTAGGTAGAAATAATTTAGTTCATAATCAGTCTTCTGTAGGACCTGCAGCAAATGAAAATGAGATTGAAGATGGAATAATTTATGATGAGAAACTGGAGGACCAGGAGCTTGAAGGTGATGATCAGAGAGATGTGGTCTACGAGGAAGAATATACTTATGTTGGAGATGAACATGCTGACCAGGAAGAATGCCTGGATGACGAAGATGGGGATGACTTTGCTAAGAAGATTGGTGTTATGCTTACATGA | 2148 | 0.4232 | MVAATQPNSQRENQQPRQRLQRQSVSRPTSSSAQEDALKRNTDCVYFLASPLTCKKGTDCEYRHSEYARVNPRDCWFWSNGNCLNPKCGYRHPPLDGLFGSQGEPVTGPPIPSSQNITTPATTTSYGPKSVPCIFFLQGQCLKGDKCLFLHGPNPEIKVPQVQGTKQKNEARGPTKTPGSLGKCNQEKRLPQANVANSAQEGSGAKPVPTVRTAAETNKPCVERVVPPRINFSGNASISKATSIPAIAYGASAGQINRSHPPHFADHQNLQHGKDSEEFLRESSPGFDFDVLVDDDLRDSDDYYHNDVRYERGEESLNPVTEYDRSSENYSMVDVHNQRRFQDLRTYVSYDQIPGRHPWDHHMTSSRGLVRGPAHMERREYRKSGSPENVVSDLRHRLSQQRRVNGLRSVVSPDISLDHIEERNFRSSSRKDPVRQPLDDRLVSNRLRGRIKLPERSHANGDEGHVRGGNRSLSLERPHQERHRDRMNGRIQNDYVQERNFRVRQMRRNMNDAGRSDMFCPKSLAELKAVKHTENKEQPVLGKRKKFEDDHKSTDFSFDSPKPLSEILKEKRQAAPSATSLTFRSYNNKQEKKIDENEDIKINGSANKDVTRTQSGFASMVKENVNIDVTENVVGRNNLVHNQSSVGPAANENEIEDGIIYDEKLEDQELEGDDQRDVVYEEEYTYVGDEHADQEECLDDEDGDDFAKKIGVMLT* | 716 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte14g00565 | 715 | PANTHER | ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING | 35 | 713 | - | - | |
| Pte14g00565 | 715 | MobiDBLite | consensus disorder prediction | 190 | 204 | - | - | |
| Pte14g00565 | 715 | MobiDBLite | consensus disorder prediction | 158 | 216 | - | - | |
| Pte14g00565 | 715 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 128 | 153 | IPR000571 | GO:0046872 | |
| Pte14g00565 | 715 | MobiDBLite | consensus disorder prediction | 425 | 484 | - | - | |
| Pte14g00565 | 715 | FunFam | Zinc finger CCCH domain-containing protein 17 | 32 | 95 | - | - | |
| Pte14g00565 | 715 | Pfam | Zinc-finger containing family | 39 | 93 | IPR041686 | - | |
| Pte14g00565 | 715 | SMART | c3hfinal6 | 71 | 94 | IPR000571 | GO:0046872 | |
| Pte14g00565 | 715 | SMART | c3hfinal6 | 39 | 66 | IPR000571 | GO:0046872 | |
| Pte14g00565 | 715 | SMART | c3hfinal6 | 127 | 153 | IPR000571 | GO:0046872 | |
| Pte14g00565 | 715 | ProSiteProfiles | Zinc finger C3H1-type profile. | 38 | 67 | IPR000571 | GO:0046872 | |
| Pte14g00565 | 715 | ProSiteProfiles | Zinc finger C3H1-type profile. | 69 | 95 | IPR000571 | GO:0046872 | |
| Pte14g00565 | 715 | ProSiteProfiles | Zinc finger C3H1-type profile. | 127 | 154 | IPR000571 | GO:0046872 | |
| Pte14g00565 | 715 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Pte14g00565 | 715 | SUPERFAMILY | CCCH zinc finger | 129 | 152 | IPR036855 | GO:0046872 | |
| Pte14g00565 | 715 | Gene3D | - | 120 | 189 | - | - | |
| Pte14g00565 | 715 | Gene3D | - | 29 | 95 | - | - | |
| Pte14g00565 | 715 | MobiDBLite | consensus disorder prediction | 160 | 182 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte14g00565 | Pte-Chr14 | 26012913 | 26016524 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | C3H | Pte14g00565 | zf-CCCH_3 | 5.7e-11 | CL0537 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte14g00565 | - | - | qsa:O6P43_032347 | 599.742 |