Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00555 ATGCATTGTCATAAAGTTGCAGCACTTGTATTCCTCGTCCCCTTCGTGTTTTTCACTGCCACCTTTGGCTATTCCTCGGATGATGTAAAGCAATGGTGTAGCACAACCCCTAATCCTCAACCATGTGAGTATTTCCTCAGCAGCAAAACTGCCGCCACATCCATCAAGGAGAGTGCCCATTTCTTAAACATTTTGACACAAACTACGCTTGAACTTGCCCTTGAGGCTCACTCTAATGCCTTCTCCATTGGCTCAAAGTGCCGCAATGAGCTGGAAAAGGCAGCATGGTTCGACTGCCTTGAACTGTATGAGCACACTATTCTCAAGCTCAACAAGACCTTAGACACCAGCACCAAATGCTCGCAAGCTGATATTCAGACATGGCTCAGCACAGCTCTCACTAACCTTGAGACGTGCAAGGCAGGGTTTTATGACCTCGGTGTTGCAGACAACGTGCTGCCTATCTTGACGTCCAATAACGTCTCTAACCTGATAAGCAACGCTTTGGCCGTTAACAAGATTCAATTTAGTGAGCCCAACTACAAAAATGGATTCCCAGCATGGATCAAGCCTGGGGATCGAAAGCTTTTACAGTCATCTTCTCCGGCTTCTCAGGCTAACGCAGTGGTTGCTGCAGATGGATCAGGACAGTATAAGACATTAACCGAGGCAATCAGTGCTGCTCCAAAGAACCCAGTTCGTAGGTATATCATATATGTGAAGGCAGGAACATACAACGAGCAAGTCGTCATCAGGTCCACGAATATCATGTTGGTTGGAGATGGCATTGGACGGTCAGTGATCACTGGCAGCAAGAGCGTGGGAGGAGGAACTACAACCTTCGCTTCGGCCACGGTTGCTGTTGTGGGTGACGGGTTTATTGCCAGAGATATCACATTCCGAAACACTGCCGGCGCTGCGAATCATCAAGCTGTGGCACTACGTTCAGGCTCAGATCTCTCAGTATTCTACAGATGCGGCTTTGAAGGCTATCAAGACACTCTGTATGCATATGCTGACAGACAATTCTACAGAGAGTGTGATATATACGGCACAATTGACTTCATATTTGGGAATGCTGCTGTGGTCTTTCAGAACTCTAACATTTATGCGCGTAACACTCCTAGCAAAGTCAACACCGTGACTGCACAAGGCCGAACAGACCCCAATCAGAACACTGGAATCTCCATTCACAATTCCAGAGTTACTGCTGCTTCAGATTTGATTCCAGTTCAAACCTCAGTGAAGACATTCTTGGGAAGGCCGTGGCAGCAGTACTCTCGCACTGTTTTCATGAAGACATATCTTGATCGCTTGATTGATCCAGCTGGCTGGACCGAATGGAATGGCAACTTTGCTCTCAACACGTTGTACTATGGAGAGTACATGAACACCGGCCCCGGATCCTCCACTGCAAATAGAGTCAAGTGGGGAGGTTACCGTGTCATCACCACTGTCGCCGAGGCTTCCAAATTTACGGTCGGCAACTTCATTGCTGGAAATTCTTGGTTACCTTCCACCAGCGTCCCCTTCACATCAGGCCTCTGA 1548 0.4793 MHCHKVAALVFLVPFVFFTATFGYSSDDVKQWCSTTPNPQPCEYFLSSKTAATSIKESAHFLNILTQTTLELALEAHSNAFSIGSKCRNELEKAAWFDCLELYEHTILKLNKTLDTSTKCSQADIQTWLSTALTNLETCKAGFYDLGVADNVLPILTSNNVSNLISNALAVNKIQFSEPNYKNGFPAWIKPGDRKLLQSSSPASQANAVVAADGSGQYKTLTEAISAAPKNPVRRYIIYVKAGTYNEQVVIRSTNIMLVGDGIGRSVITGSKSVGGGTTTFASATVAVVGDGFIARDITFRNTAGAANHQAVALRSGSDLSVFYRCGFEGYQDTLYAYADRQFYRECDIYGTIDFIFGNAAVVFQNSNIYARNTPSKVNTVTAQGRTDPNQNTGISIHNSRVTAASDLIPVQTSVKTFLGRPWQQYSRTVFMKTYLDRLIDPAGWTEWNGNFALNTLYYGEYMNTGPGSSTANRVKWGGYRVITTVAEASKFTVGNFIAGNSWLPSTSVPFTSGL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00555 515 FunFam Pectinesterase 201 515 - -
Pte14g00555 515 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 174 IPR035513 -
Pte14g00555 515 SMART PMEI_2 24 171 IPR006501 GO:0004857
Pte14g00555 515 Gene3D - 202 515 IPR012334 -
Pte14g00555 515 SUPERFAMILY Pectin lyase-like 201 514 IPR011050 -
Pte14g00555 515 CDD PMEI-like_3 32 173 - -
Pte14g00555 515 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Pte14g00555 515 Pfam Plant invertase/pectin methylesterase inhibitor 28 170 IPR006501 GO:0004857
Pte14g00555 515 PANTHER PECTINESTERASE 13 507 - -
Pte14g00555 515 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 174 IPR035513 -
Pte14g00555 515 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Pte14g00555 515 Pfam Pectinesterase 207 501 IPR000070 GO:0030599|GO:0042545
Pte14g00555 515 NCBIfam pectinesterase inhibitor domain 8 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00555 Pte-Chr14 25769210 25770967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00555 1 516 Carbohydrate Esterase AT2G45220 64.093 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00555 K01051 - gmx:100781697 751.125