Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00553 ATGGAGCCTGCATTCTCTACCCACTCCAACCCTCTTCTTTGCTCAACCAATGGTGACGAACACGAAGCTCGATTCAACATTCCAAGGAAGATGATGCCAAAGAAGCAGATCTCAACGGAAGCAGCTGTGAACATAGTAAAGGATAAGTTGAAGCAGGACGCCACCCCCAAGCTGAACCTAGCAACCTTTGTCACATCAACTATGGAACCAGAATGTGAGGAGATTATGTTAGAGTCCATGAACAAGAACTGTGCAAACGCTTTTGAATACCCTGCAACTGCTGAAATGGAGAGAAGTTGTGTAAACATGCTTGCAAATTTGTATCACGCTCCACTGGAAGAATCAGATGAAGCAGTTGGGGTTGCAACTATAGGTTCATCAGAGGGAGCTATGCTTGCTGGCCTTGCATTCAAAACAAAGTGGCAGAACAGCAGGAAGGCCAAGGGTGAACTTATTAGCAACCCCAACATTGTGATTGGATCCAACTTGCAGGTATGTTGGAAAAAATTTGCAAGGTACTTCGAGGTGGACTTGAAGGAAGTAAAAGTGAGAGAAGGGTATTATGTGATGGATCCATACAAGGCAGTAGCAATGGTAGACGACCATACAATCTGTGTGGTTAGTATCTTGGGGTCAAGCTATAATGGAGAGTTTGAGGATGTCAAGCTTTTGAATGAACTCTTGAATCAGAAAAACAAAGAAAAAGGATGGAACGTTCCAATTCATGTTGATGCCGCTAGTGGTGGATTTATTGCACCATTTTGTGAGCCAGAGCTAGAGTGGGACTTCAGGCTTCCACTGGTGAAGAGCATCAATGTGAGTGGTCACAAATATGGATTAGTCTATCCTGGGGTTGGATGGACCATTTGGAGAACCAAAGAAGACTTGCCTGAAGATTTGATCTTCCATTATAGTCTCTTCAGTGCTGAGCAGCCAACCATCACCCTCAATATGTCCAAAAGTTCAAGTCAAATCATTGCTCAATATTATCAAATGATTCGCTTAGGTCATGAGGGTTACAGGAATTTGATGCAGACTTGCAGGCAGAATGCTAAAGTTATTACAGAAGGGCTTCAAAAGATTGGGGGGTTGAACATTATATCAAAGGATACTGGGATTCCAATGGTGGTGTTTAATCTCAAAGACAAAACCTCCTCCAATGAATATGAACTATGTGACAAGTTGTGTCAGTTTGGTTGGATTATACGAGCTTATCCTATGCCTCCTGGTGCTGAGCATGTCACTGCTGTTCGCATAGTTGTAAGGCCAGACCTGTCTCGTGCACTCGTTGAGAAACTCCTGCTCGACATTGCTAAGGTCATTCCCAAATAA 1332 0.4339 MEPAFSTHSNPLLCSTNGDEHEARFNIPRKMMPKKQISTEAAVNIVKDKLKQDATPKLNLATFVTSTMEPECEEIMLESMNKNCANAFEYPATAEMERSCVNMLANLYHAPLEESDEAVGVATIGSSEGAMLAGLAFKTKWQNSRKAKGELISNPNIVIGSNLQVCWKKFARYFEVDLKEVKVREGYYVMDPYKAVAMVDDHTICVVSILGSSYNGEFEDVKLLNELLNQKNKEKGWNVPIHVDAASGGFIAPFCEPELEWDFRLPLVKSINVSGHKYGLVYPGVGWTIWRTKEDLPEDLIFHYSLFSAEQPTITLNMSKSSSQIIAQYYQMIRLGHEGYRNLMQTCRQNAKVITEGLQKIGGLNIISKDTGIPMVVFNLKDKTSSNEYELCDKLCQFGWIIRAYPMPPGAEHVTAVRIVVRPDLSRALVEKLLLDIAKVIPK* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00553 443 SUPERFAMILY PLP-dependent transferases 22 441 IPR015424 -
Pte14g00553 443 Pfam Pyridoxal-dependent decarboxylase conserved domain 40 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pte14g00553 443 Gene3D - 66 360 IPR015421 GO:0003824
Pte14g00553 443 FunFam Glutamate decarboxylase 66 360 - -
Pte14g00553 443 PANTHER GLUTAMATE DECARBOXYLASE 22 441 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte14g00553 443 Gene3D - 362 443 - -
Pte14g00553 443 NCBIfam glutamate decarboxylase 26 441 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte14g00553 443 Gene3D - 15 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00553 Pte-Chr14 25661554 25664045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00553 23 441 Calmodulin-binding Proteins AT5G17330 63.962 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00553 K01580 - nnu:104611053 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00553 14 25661554 25664045 Pte14g00553 14 25661554 25664045 RCT