Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00500 ATGGAAATTGCACGCACTGGAGTTTACGTTGACGATTACCTGGAATATGCAAACACATTACCTGCTGAGCTTCAAAGACTACAGAATACAGTTAGAGAGCTCGATGATCGATCTCAATCTATGATAAACCAAACGAGGCAGCAAACCCAGTATTGTTTGGGATTGTCATCACAGGGGTCAAAGAAAAACAATCACAACATATATAGTCATTATAATACTAACAATGAAGAAGATGAGTTGGAAATTGAGAAAATTCGGTTTGATGTTGAGGCAATTCAAGACAATGCATTGAGTCTTTGTACTGAGAAGGTGTTGTTGGCACGCCAAGCTTATGACTTGATTGACAGCCATATCAAAAGGCTTGATGAGGATTTGAATAATTTTGCTGACGACCTAAAGCAAGAGGGAAAAATACCACCTGATGAACTGGCAATCCTTCCTCCTTTGCCTTTAGTTCTGAGAAATGAAAAACGCAAACCATTTTACATAACTCCCCAGTCAAAAAGGCTTGATCTCAGAGATAGGGAATGGGATAGAGATCGTGACAGGGATTTTGAACTCATGCCTCCACCTGGAAGCCATAAAAAGGATTATCCAATTGCCATGGACATTGATCAACCCATTGATCCAAATGAACCTACGTACTGTGTTTGTCGCCAGGTGTCATATGGAGATATGATTGCGTGTGACAATGACAATTGTCAAGGAGGTGAATGGTTCCACTACTCTTGTGTTGGTTTAACACCAGAAACAAAATTCAAAGGAAAGTGGTATTGCCCAACATGCAGATCGCTATCTCACTGTCAATTTTAG 813 0.4022 MEIARTGVYVDDYLEYANTLPAELQRLQNTVRELDDRSQSMINQTRQQTQYCLGLSSQGSKKNNHNIYSHYNTNNEEDELEIEKIRFDVEAIQDNALSLCTEKVLLARQAYDLIDSHIKRLDEDLNNFADDLKQEGKIPPDELAILPPLPLVLRNEKRKPFYITPQSKRLDLRDREWDRDRDRDFELMPPPGSHKKDYPIAMDIDQPIDPNEPTYCVCRQVSYGDMIACDNDNCQGGEWFHYSCVGLTPETKFKGKWYCPTCRSLSHCQF* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00500 270 SMART PHD_3 215 263 IPR001965 -
Pte14g00500 270 PANTHER INHIBITOR OF GROWTH PROTEIN 2 263 IPR028651 -
Pte14g00500 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 264 IPR013083 -
Pte14g00500 270 CDD ING_plant 19 125 - -
Pte14g00500 270 CDD PHD_ING 215 262 - -
Pte14g00500 270 Gene3D - 5 126 - -
Pte14g00500 270 ProSiteProfiles Zinc finger PHD-type profile. 213 265 IPR019787 -
Pte14g00500 270 FunFam PHD finger protein ING 207 265 - -
Pte14g00500 270 Pfam PHD-finger 215 264 IPR019787 -
Pte14g00500 270 SUPERFAMILY FYVE/PHD zinc finger 191 263 IPR011011 -
Pte14g00500 270 Coils Coil 17 44 - -
Pte14g00500 270 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 128 IPR024610 -
Pte14g00500 270 SMART ING_2 9 128 IPR024610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00500 Pte-Chr14 24396673 24399296 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pte14g00500 ING 6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00500 - - cave:132192156 451.055