Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte14g00500 | ATGGAAATTGCACGCACTGGAGTTTACGTTGACGATTACCTGGAATATGCAAACACATTACCTGCTGAGCTTCAAAGACTACAGAATACAGTTAGAGAGCTCGATGATCGATCTCAATCTATGATAAACCAAACGAGGCAGCAAACCCAGTATTGTTTGGGATTGTCATCACAGGGGTCAAAGAAAAACAATCACAACATATATAGTCATTATAATACTAACAATGAAGAAGATGAGTTGGAAATTGAGAAAATTCGGTTTGATGTTGAGGCAATTCAAGACAATGCATTGAGTCTTTGTACTGAGAAGGTGTTGTTGGCACGCCAAGCTTATGACTTGATTGACAGCCATATCAAAAGGCTTGATGAGGATTTGAATAATTTTGCTGACGACCTAAAGCAAGAGGGAAAAATACCACCTGATGAACTGGCAATCCTTCCTCCTTTGCCTTTAGTTCTGAGAAATGAAAAACGCAAACCATTTTACATAACTCCCCAGTCAAAAAGGCTTGATCTCAGAGATAGGGAATGGGATAGAGATCGTGACAGGGATTTTGAACTCATGCCTCCACCTGGAAGCCATAAAAAGGATTATCCAATTGCCATGGACATTGATCAACCCATTGATCCAAATGAACCTACGTACTGTGTTTGTCGCCAGGTGTCATATGGAGATATGATTGCGTGTGACAATGACAATTGTCAAGGAGGTGAATGGTTCCACTACTCTTGTGTTGGTTTAACACCAGAAACAAAATTCAAAGGAAAGTGGTATTGCCCAACATGCAGATCGCTATCTCACTGTCAATTTTAG | 813 | 0.4022 | MEIARTGVYVDDYLEYANTLPAELQRLQNTVRELDDRSQSMINQTRQQTQYCLGLSSQGSKKNNHNIYSHYNTNNEEDELEIEKIRFDVEAIQDNALSLCTEKVLLARQAYDLIDSHIKRLDEDLNNFADDLKQEGKIPPDELAILPPLPLVLRNEKRKPFYITPQSKRLDLRDREWDRDRDRDFELMPPPGSHKKDYPIAMDIDQPIDPNEPTYCVCRQVSYGDMIACDNDNCQGGEWFHYSCVGLTPETKFKGKWYCPTCRSLSHCQF* | 271 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte14g00500 | 270 | SMART | PHD_3 | 215 | 263 | IPR001965 | - | |
Pte14g00500 | 270 | PANTHER | INHIBITOR OF GROWTH PROTEIN | 2 | 263 | IPR028651 | - | |
Pte14g00500 | 270 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 203 | 264 | IPR013083 | - | |
Pte14g00500 | 270 | CDD | ING_plant | 19 | 125 | - | - | |
Pte14g00500 | 270 | CDD | PHD_ING | 215 | 262 | - | - | |
Pte14g00500 | 270 | Gene3D | - | 5 | 126 | - | - | |
Pte14g00500 | 270 | ProSiteProfiles | Zinc finger PHD-type profile. | 213 | 265 | IPR019787 | - | |
Pte14g00500 | 270 | FunFam | PHD finger protein ING | 207 | 265 | - | - | |
Pte14g00500 | 270 | Pfam | PHD-finger | 215 | 264 | IPR019787 | - | |
Pte14g00500 | 270 | SUPERFAMILY | FYVE/PHD zinc finger | 191 | 263 | IPR011011 | - | |
Pte14g00500 | 270 | Coils | Coil | 17 | 44 | - | - | |
Pte14g00500 | 270 | Pfam | Inhibitor of growth proteins N-terminal histone-binding | 9 | 128 | IPR024610 | - | |
Pte14g00500 | 270 | SMART | ING_2 | 9 | 128 | IPR024610 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte14g00500 | Pte-Chr14 | 24396673 | 24399296 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Pte14g00500 | ING | 6e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte14g00500 | - | - | cave:132192156 | 451.055 |