Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00481 ATGCAGGCCGATACAATCTCAGAGACACATCACCCTCCTTCAGACTCTGCTTCTCCTATGTTAGCCATCGGCGTGCTAGGCATCGTGGCAACAGTTTTTGCACTTGTGTGCTACTTCGTTTTTGTGAATAGATGCTGCTCAAACTGGCGTCATGTAAACTTGTTAAGATGGTTTCCCGTGTCACGTCCACGACAAGATGAAGATCCCTTCATAGCATTCTCCCCCACAATGTGGAATCGTGGCCTTGATGACTCAGTGATCAAAGGAATCCCAGCTATCCGATACAGTAAACCAGAAGGTAAGGAGAAAGGTGTGTTGGGTTGTGTTGTATGTTTGAATGAGTTTCAACAAGGGGATCCACTGAAAGTTCTTCCAGTTTGTAGCCATGCATTTCATACAGATTGCATTGACATCTGGCTGGAAAGCAATGCCAACTGTCCTCTTTGTAGATCAAGCATTTCTGGTACTAAATATTCTCATGGGAATCACATAATTGCGCCGAGCTCTTCACCTCAAGATTCTCAAATACTTTCTAACATTAGTGATGAAGATTTTGTTGTGATTGAATTGGGAGAAGATGGTGAAGCATTGCCACAAAGAAGACGAGATAGAAATGAATTACGGGAAGCTTTTGATCACTGCAGGAGTCCTCCTCCTCATCATCATCAGTTGTCCAGAAAATATAAAGTTGGAGACTTGAAAACCAGAAAATGTCACCATGTGTCAATCATGGGAGATGAGTGCATTAACGTAAGGGAAAACGACGAACAGTTCTCAGTCCAACCAATTCGGAGATCTTTCTCAATGGATTCAGCGGCTGACAGACAACTTTACTTGACTATCGAAGAGATAATTCAAGACAACATGCATGTTAATGAAGTCAGGGGAAGTGATTATCACGATAATAGAGGTCGAAGATCATTCTTTCCATTTTGCCATGGTCGCGGATCAAGGAATGCAGTTCTTCCTCTGGAAAATGAGACTTGA 987 0.4265 MQADTISETHHPPSDSASPMLAIGVLGIVATVFALVCYFVFVNRCCSNWRHVNLLRWFPVSRPRQDEDPFIAFSPTMWNRGLDDSVIKGIPAIRYSKPEGKEKGVLGCVVCLNEFQQGDPLKVLPVCSHAFHTDCIDIWLESNANCPLCRSSISGTKYSHGNHIIAPSSSPQDSQILSNISDEDFVVIELGEDGEALPQRRRDRNELREAFDHCRSPPPHHHQLSRKYKVGDLKTRKCHHVSIMGDECINVRENDEQFSVQPIRRSFSMDSAADRQLYLTIEEIIQDNMHVNEVRGSDYHDNRGRRSFFPFCHGRGSRNAVLPLENET* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00481 328 FunFam E3 ubiquitin-protein ligase ATL6 73 156 - -
Pte14g00481 328 CDD RING-H2_EL5-like 108 150 - -
Pte14g00481 328 PANTHER RING-H2 FINGER PROTEIN ATL16 8 325 IPR044600 GO:0016567|GO:0016740
Pte14g00481 328 SUPERFAMILY RING/U-box 104 154 - -
Pte14g00481 328 Pfam Ring finger domain 108 150 IPR001841 -
Pte14g00481 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 155 IPR013083 -
Pte14g00481 328 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Pte14g00481 328 SMART ring_2 108 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00481 Pte-Chr14 23503151 23504213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00481 14 285 C3H Transcription Factor Family AT1G04360 42.000 8.16e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00481 K19041 - qsu:112025162 395.586