Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00479 ATGAATTTCAGCTCTTGCAGATCATTCAAAAGCGCAAGTCCACAGTTGTCTACAGAAAAATGCCTTCAAGACTCTTTCAGCTTGTGGGACGAGTTCTTGCTATTCGACAACGTCCTTCCCTTCAATTTCTGCAGTGATCATTTGCCAGATATGGTACTTGACGATTCAGTGGATAAGGGAACCAAGGATCCCTCGTCAGAATCCAATTCTGCAACATATACTGCAGCGCTAGTCCAACAAGTGAAGGAAGACCAAGAAGTCATTTCTGATAGCTCATATGTAAAAGTCGAAGATGATGATTGTGAACCAAGATCAGCAGCAATGGTTGCAAGGCCCCTATCCCGTGCACTGCCTCAGACTGGCTCTACTGAAAAACGGAAGAGGGCCTACAGAGGAGTAAGGAGGCGACCTTGGGGAAAGTTTGCTTCAGAGATAAGAGACTCTACTAGGCAAGGGGTTAGAGTATGGCTTGGAACATTTGATACAGCTGAAGCAGCAGCTTTGGCATATGATCAAGCTGCATTTTCGATGCGCGGTTCAATGGCTGTACTTAACTTTTCAGAGGAAATAGTGAGGGACTCACTCAGAGACATGAAATGCAAGTATTGGGACGATGGTTCCTCACCTGTATTGGCACTCAAGAGGAAGCACTGCTTGAGAACAAGGTCACAGCTGCCGCCAGGGAAAAGGACACAGAGAAAAACTTCAGCAAATCAAGCTACGCAGAATTTGGTCGTGTTGGAAGACCTGGGAACTGAATATCTAGATCAACTGCTAAGCTTAACCTCATTCTAG 795 0.4553 MNFSSCRSFKSASPQLSTEKCLQDSFSLWDEFLLFDNVLPFNFCSDHLPDMVLDDSVDKGTKDPSSESNSATYTAALVQQVKEDQEVISDSSYVKVEDDDCEPRSAAMVARPLSRALPQTGSTEKRKRAYRGVRRRPWGKFASEIRDSTRQGVRVWLGTFDTAEAAALAYDQAAFSMRGSMAVLNFSEEIVRDSLRDMKCKYWDDGSSPVLALKRKHCLRTRSQLPPGKRTQRKTSANQATQNLVVLEDLGTEYLDQLLSLTSF* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00479 264 SMART rav1_2 129 193 IPR001471 GO:0003700|GO:0006355
Pte14g00479 264 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Pte14g00479 264 Gene3D AP2/ERF domain 129 188 IPR036955 GO:0003700|GO:0006355
Pte14g00479 264 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Pte14g00479 264 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Pte14g00479 264 FunFam Ethylene-responsive transcription factor 2 128 188 - -
Pte14g00479 264 CDD AP2 130 186 IPR001471 GO:0003700|GO:0006355
Pte14g00479 264 SUPERFAMILY DNA-binding domain 129 188 IPR016177 GO:0003677
Pte14g00479 264 PANTHER DNA-BINDING DOMAIN 86 259 IPR044808 GO:0003700|GO:0009873
Pte14g00479 264 ProSiteProfiles AP2/ERF domain profile. 129 187 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00479 Pte-Chr14 23497649 23498736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00479 114 259 AP2-EREBP Transcription Factor Family AT3G23240 58.389 2.57e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte14g00479 AP2 4.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00479 K14516 - qsa:O6P43_006909 211.46