Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00478 ATGAATTCCAATGTGGATTTCAGTTCTTCTTTCTTTCACTACTCCAGTCCATCATCCTTCTCTGACAGTAACCATTCCTACTCTGGGGATGAGCTGAGCTTGTTTTTCGATCAGGAATACCATCTTCCATTCAACTTCAACGACCCACAAGATACGATTCTCTACAATATTGTGGCCCAAGCAATGAAGATGGAACCATCGTCTGGCTCCAGCAATATTTCTTCCTCATTGGACAATGATGGTGCAGCAATAGTCCAACAGAATCATGAAGACCGAGAAGTAGAAGTTACTTCCATTGATGTAAATTACCACGAATCACAAGTTCCACAACAATCACCGCAGCCGCCGACATCCAAGAGCAGCAAGAAAAAGACTAGAGCTTTCAGAGGAGTGAGGGCTAGGCCATGGGGAAAGTTTGCTGCGGAGATAAGGGACTCCACCAGGAACGGGGTTAGAGTATGGCTCGGAACATTTGATACGGCAGAAGCAGCAGCGTTGGCCTACGATCAAGCTGCATTTTCCATGAAGGGTTCGATGGCTGTGCTTAACTTCCCGGAGGAAGTAGTGAAGGATTCACTGGGAGAAATGAAAAGCAAAAACTGGGAAGATGGTTGCTCTCCCGTTTTGGCACTCAAGAAGAAGCATAGCTTAAGAAGAAAGTCGATGATCAGAAGGAAGAGTAATGGGAAAACAAAATTACAAAGTACACACAACGAAGAAGTGTTTGTTTTTGAGGATTTAGGAGCTGAATACCTAGAGCAGCTTTTGAGCATGACTGAAACTTCTGATCAGTCATAG 798 0.4436 MNSNVDFSSSFFHYSSPSSFSDSNHSYSGDELSLFFDQEYHLPFNFNDPQDTILYNIVAQAMKMEPSSGSSNISSSLDNDGAAIVQQNHEDREVEVTSIDVNYHESQVPQQSPQPPTSKSSKKKTRAFRGVRARPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFSMKGSMAVLNFPEEVVKDSLGEMKSKNWEDGCSPVLALKKKHSLRRKSMIRRKSNGKTKLQSTHNEEVFVFEDLGAEYLEQLLSMTETSDQS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00478 265 MobiDBLite consensus disorder prediction 105 121 - -
Pte14g00478 265 PANTHER DNA-BINDING DOMAIN 83 259 IPR044808 GO:0003700|GO:0009873
Pte14g00478 265 CDD AP2 128 186 IPR001471 GO:0003700|GO:0006355
Pte14g00478 265 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Pte14g00478 265 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Pte14g00478 265 SMART rav1_2 127 191 IPR001471 GO:0003700|GO:0006355
Pte14g00478 265 Gene3D AP2/ERF domain 127 187 IPR036955 GO:0003700|GO:0006355
Pte14g00478 265 FunFam Ethylene-responsive transcription factor 2 126 186 - -
Pte14g00478 265 ProSiteProfiles AP2/ERF domain profile. 127 185 IPR001471 GO:0003700|GO:0006355
Pte14g00478 265 Pfam AP2 domain 128 177 IPR001471 GO:0003700|GO:0006355
Pte14g00478 265 MobiDBLite consensus disorder prediction 105 127 - -
Pte14g00478 265 SUPERFAMILY DNA-binding domain 128 186 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00478 Pte-Chr14 23493607 23494404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00478 42 262 AP2-EREBP Transcription Factor Family AT3G23240 46.606 8.89e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte14g00478 AP2 5.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00478 K14516 - qsa:O6P43_006909 231.491