Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00477 ATGAATTCCAATGTGGATTTCAGTTCTTCTCTCTTTCACTTCTCCAGTCCATCATCCTTCTCTGAAAGTAACCACTCCTACTCTGGGGACGAGCTGAGCTTGTTTTTGGATCTTCTTCCATTCAACTTCAACGACCCACATGATACGATTCTCTACAATATTGTGGCCCAAGCAATGAAGATGGAACCATCGTCTGGCTCCAGCAACATTTCTTCCTCATTGGACAATGATGGTGCAGCAATAGTCCAACATAATCATGAAGACCAAGAAGTAGAAGTTACTTCCATTGATGTAAATAACCACAAATCACAAGTTCCACAACAATCACCGCAGCCGCCGACATCCAAGAGCAGCAAGAAAAAGACTAGAGCTTTCAGAGGAGTGAGGGCTAGGCCATGGGGAAAGTTTGCTGCGGAGATAAGGGACTCCACCAGGAACGGGGTTAGAGTATGGCTCGGAACATTTGATACGGCAGAAGCAGCAGCGTTGGCCTACGATCAAGCTGCATTTTCCATGAAGGGTTCGATGGCTGTGCTTAACTTCCCGGAGGAAGTAGTGAAGGATTCACTGGGAGAAATGAAAAAGCAGAAACTGGGAAGATGGTTGCTCTCCCGTTTTGGCACTCAAGAAGAAGCATAG 639 0.4617 MNSNVDFSSSLFHFSSPSSFSESNHSYSGDELSLFLDLLPFNFNDPHDTILYNIVAQAMKMEPSSGSSNISSSLDNDGAAIVQHNHEDQEVEVTSIDVNNHKSQVPQQSPQPPTSKSSKKKTRAFRGVRARPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFSMKGSMAVLNFPEEVVKDSLGEMKKQKLGRWLLSRFGTQEEA* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00477 212 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
Pte14g00477 212 FunFam Ethylene-responsive transcription factor 2 123 183 - -
Pte14g00477 212 MobiDBLite consensus disorder prediction 102 124 - -
Pte14g00477 212 MobiDBLite consensus disorder prediction 102 118 - -
Pte14g00477 212 Gene3D AP2/ERF domain 124 184 IPR036955 GO:0003700|GO:0006355
Pte14g00477 212 SUPERFAMILY DNA-binding domain 125 183 IPR016177 GO:0003677
Pte14g00477 212 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Pte14g00477 212 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Pte14g00477 212 PANTHER DNA-BINDING DOMAIN 83 185 IPR044808 GO:0003700|GO:0009873
Pte14g00477 212 CDD AP2 125 183 IPR001471 GO:0003700|GO:0006355
Pte14g00477 212 Pfam AP2 domain 125 174 IPR001471 GO:0003700|GO:0006355
Pte14g00477 212 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00477 Pte-Chr14 23482314 23483134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00477 39 194 AP2-EREBP Transcription Factor Family AT3G23240 44.872 8.16e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte14g00477 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00477 K14516 - qsa:O6P43_006909 161.384