Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00439 ATGGCGGATATGTTGGGCCTTCTGAAAATTCGTGTGAAAAGAGGTATTAATCTTGTTGTGAAGGATACTCTTACCAGTGATCCATATGTGGTTATCACCATTGATGATCAGAAACTGAAAACACGTGTCATCAAGGAAAATTGCAATCCTGTGTGGAATGAAGAATTGACCTTTTCTATCAAAGATCTCAACTGTAAAATTCATCTGACAGTTTATGACAAAGACAAGTTTACTAAAGATGACAAAATGGGGGAAGCTGAAATTGACATCGGTCCATATATTGAGAGTCTGCAGATGGGCATGACGAACCTCCCAAATGGATGTGCAGTCAAAAAGGTTCAACCCAACAGGACTAATTGTCTTGTTGATGAGAGCAGATGCGTTTGGAATGATGGGAAAATCACCCAGGAAATGATTCTCAGATTGAAAAATGTACAGAGTGGGGAAGTACAGATAGAGATTGAGTGGGTTGATGCACCAGGTTGCAAAGGTCTTGGTTCAAAGGGTCTAGATTCTTTTTGA 522 0.3985 MADMLGLLKIRVKRGINLVVKDTLTSDPYVVITIDDQKLKTRVIKENCNPVWNEELTFSIKDLNCKIHLTVYDKDKFTKDDKMGEAEIDIGPYIESLQMGMTNLPNGCAVKKVQPNRTNCLVDESRCVWNDGKITQEMILRLKNVQSGEVQIEIEWVDAPGCKGLGSKGLDSF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00439 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 158 IPR035892 -
Pte14g00439 173 Pfam C2 domain 7 94 IPR000008 -
Pte14g00439 173 Gene3D C2 domain 3 163 IPR035892 -
Pte14g00439 173 SMART C2_3c 7 102 IPR000008 -
Pte14g00439 173 PRINTS C2 domain signature 22 34 IPR000008 -
Pte14g00439 173 PRINTS C2 domain signature 67 75 IPR000008 -
Pte14g00439 173 PRINTS C2 domain signature 46 59 IPR000008 -
Pte14g00439 173 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Pte14g00439 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00439 Pte-Chr14 22433169 22434320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00439 38 169 C2H2 Transcription Factor Family AT1G70790 64.179 6.60e-62 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00439 - - qsa:O6P43_032566 267.314