Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00410 ATGGAGTGTTTGAAGAACCATGTGGTGGACATGGGTGGGCACGGCCTTGACGGCTGCGGAGATTTCATGCCAGCTGGAGCTGAAGGTACACTTGATGCTCTCAAATGTGCAGCGTGCAGTTGGCACCGGAATTTCCACCGGAAAGAAACTGAAAAAGGCAGTGTTGCTGGAGTCGGTGGCACACAGAGCACGAGGGAGCTAGATTAG 207 0.5362 MECLKNHVVDMGGHGLDGCGDFMPAGAEGTLDALKCAACSWHRNFHRKETEKGSVAGVGGTQSTRELD* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00410 68 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 2 49 IPR006456 -
Pte14g00410 68 Pfam ZF-HD protein dimerisation region 2 50 IPR006456 -
Pte14g00410 68 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 1 49 IPR006456 -
Pte14g00410 68 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00410 Pte-Chr14 20935582 20935788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00410 2 51 ZF-HD Transcription Factor Family AT4G24660 76.000 1.15e-23 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte14g00410 ZF-HD_dimer 5.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00410 - - cave:132188408 101.293